BLASTX nr result
ID: Chrysanthemum21_contig00038255
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum21_contig00038255
(438 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|OTF94027.1| putative ribonuclease H-like domain-containing pr... 146 3e-39
gb|OTF97513.1| putative ribonuclease H-like domain-containing pr... 137 1e-36
gb|OTG03795.1| putative ribonuclease H-like domain-containing pr... 137 8e-35
gb|OTG07231.1| putative ribonuclease H-like domain, Reverse tran... 130 3e-32
gb|OMO87137.1| Integrase, catalytic core [Corchorus capsularis] 127 3e-31
gb|PLY93756.1| hypothetical protein LSAT_6X86400 [Lactuca sativa] 127 5e-31
ref|XP_017415205.1| PREDICTED: retrovirus-related Pol polyprotei... 114 2e-26
ref|XP_017415203.1| PREDICTED: retrovirus-related Pol polyprotei... 114 2e-26
ref|XP_017415202.1| PREDICTED: retrovirus-related Pol polyprotei... 114 2e-26
ref|XP_019252834.1| PREDICTED: uncharacterized protein LOC109231... 113 2e-26
gb|PNY12475.1| retroelement pol polyprotein-like [Trifolium prat... 113 3e-26
ref|XP_021746631.1| uncharacterized protein LOC110712474 [Chenop... 112 8e-26
gb|OMO90088.1| Integrase, catalytic core [Corchorus capsularis] 111 1e-25
dbj|GAU21017.1| hypothetical protein TSUD_201660 [Trifolium subt... 111 1e-25
ref|XP_021867405.1| uncharacterized protein LOC110806076 [Spinac... 111 1e-25
ref|XP_010692480.1| PREDICTED: uncharacterized protein LOC104905... 111 2e-25
gb|EOY05030.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) ... 110 3e-25
ref|XP_019261987.1| PREDICTED: uncharacterized protein LOC109239... 110 4e-25
ref|XP_016442574.1| PREDICTED: uncharacterized protein LOC107767... 110 4e-25
gb|PNX92993.1| retrovirus-related Pol polyprotein from transposo... 110 4e-25
>gb|OTF94027.1| putative ribonuclease H-like domain-containing protein [Helianthus
annuus]
Length = 430
Score = 146 bits (368), Expect = 3e-39
Identities = 63/105 (60%), Positives = 85/105 (80%), Gaps = 1/105 (0%)
Frame = +2
Query: 2 ECILTATYIVHRFPSKVINDKTSYEVLFEQNPEYDHIRVFGCLAY*KNTETNGDEFEPRG 181
EC++TA YI++R PSK I++KT +E+LFE+ PEY+H++VFGCLAY +NT+T GD+FE +G
Sbjct: 192 ECVMTAAYIINRLPSKTIDNKTPFEILFEEKPEYEHMKVFGCLAYFRNTDTKGDKFEWKG 251
Query: 182 KPGVFLGYPPGKKG-*IYDLEQRKMVITRDARFIEEMFPFSKAEP 313
KPGVFLGYPPG KG IYD+ KMV++RD RF+E FP+ +P
Sbjct: 252 KPGVFLGYPPGTKGYKIYDMVHNKMVVSRDVRFVENNFPYRNLDP 296
>gb|OTF97513.1| putative ribonuclease H-like domain-containing protein [Helianthus
annuus]
Length = 314
Score = 137 bits (344), Expect = 1e-36
Identities = 67/143 (46%), Positives = 95/143 (66%), Gaps = 1/143 (0%)
Frame = +2
Query: 2 ECILTATYIVHRFPSKVINDKTSYEVLFEQNPEYDHIRVFGCLAY*KNTETNGDEFEPRG 181
ECILTATYI++R PSKVI +KT YE+L + P YDH+RV GCLAY ++ ETNGD+FE RG
Sbjct: 53 ECILTATYIINRLPSKVIGNKTPYELLHGEKPNYDHMRVLGCLAYYRSVETNGDKFEIRG 112
Query: 182 KPGVFLGYPPGKKG-*IYDLEQRKMVITRDARFIEEMFPFSKAEPKVFEQEIFECSSPIS 358
+PGVF+GYP G KG ++D K++ +RD +F E++FPF+ + ++ +E + +
Sbjct: 113 RPGVFMGYPSGTKGYKVFDPSGGKIITSRDVKFAEKVFPFATS----IKENQYEENDMFT 168
Query: 359 QNDEPHEEPAKNIEKNEEQTHSM 427
+ EP K E NE Q +
Sbjct: 169 LFPDEENEPTKPTESNEGQVEEV 191
>gb|OTG03795.1| putative ribonuclease H-like domain-containing protein [Helianthus
annuus]
Length = 1050
Score = 137 bits (346), Expect = 8e-35
Identities = 67/141 (47%), Positives = 95/141 (67%), Gaps = 1/141 (0%)
Frame = +2
Query: 2 ECILTATYIVHRFPSKVINDKTSYEVLFEQNPEYDHIRVFGCLAY*KNTETNGDEFEPRG 181
ECI TA YI++R PSKVI +KT YE++F + P+YD +RV GCLAY ++ ETNGD+FE RG
Sbjct: 259 ECIQTACYIINRLPSKVIGNKTPYEIVFRKKPDYDRLRVMGCLAYYRSIETNGDKFEFRG 318
Query: 182 KPGVFLGYPPGKKG-*IYDLEQRKMVITRDARFIEEMFPFSKAEPKVFEQEIFECSSPIS 358
+PGVFLGYP G KG I+D+E K+ ++RD F+E++FPF K + Q++F + P
Sbjct: 319 RPGVFLGYPQGTKGYKIFDVEHGKIAVSRDVTFVEKVFPFEKLKTNNSNQDLF--NVPEE 376
Query: 359 QNDEPHEEPAKNIEKNEEQTH 421
+ EEP + + + H
Sbjct: 377 DYEIIFEEPYNSQKATQMDPH 397
>gb|OTG07231.1| putative ribonuclease H-like domain, Reverse transcriptase,
RNA-dependent DNA polymerase [Helianthus annuus]
Length = 720
Score = 130 bits (327), Expect = 3e-32
Identities = 61/113 (53%), Positives = 79/113 (69%), Gaps = 1/113 (0%)
Frame = +2
Query: 2 ECILTATYIVHRFPSKVINDKTSYEVLFEQNPEYDHIRVFGCLAY*KNTETNGDEFEPRG 181
EC+LTA YI++R PSK I DKT YE+L Q PEYDH++VFGCL Y + ET GD+FE RG
Sbjct: 99 ECVLTAAYIINRLPSKTIGDKTPYEILHNQKPEYDHMKVFGCLTYFWSIETKGDKFEVRG 158
Query: 182 KPGVFLGYPPGKKG-*IYDLEQRKMVITRDARFIEEMFPFSKAEPKVFEQEIF 337
+ G+FLGYP G KG I+D+E +KMV++RD +F E F F + +IF
Sbjct: 159 RLGIFLGYPQGTKGYKIFDIEDKKMVVSRDVKFHENTFTFPAQNQPGNDDDIF 211
>gb|OMO87137.1| Integrase, catalytic core [Corchorus capsularis]
Length = 1257
Score = 127 bits (320), Expect = 3e-31
Identities = 57/100 (57%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
Frame = +2
Query: 2 ECILTATYIVHRFPSKVINDKTSYEVLFEQNPEYDHIRVFGCLAY*KNTETNGDEFEPRG 181
EC+LTATYI++R PSKVIN+KT +E+LF + PEYDH+RVFGCL Y + GD+F RG
Sbjct: 519 ECVLTATYIINRLPSKVINNKTPFEMLFGKKPEYDHLRVFGCLVYAHDNSKRGDKFSERG 578
Query: 182 KPGVFLGYPPGKKG-*IYDLEQRKMVITRDARFIEEMFPF 298
KP VF+GYP G+KG +YDL+++K +RD F E ++PF
Sbjct: 579 KPCVFVGYPNGQKGYRVYDLKEKKFYTSRDVTFFENIYPF 618
>gb|PLY93756.1| hypothetical protein LSAT_6X86400 [Lactuca sativa]
Length = 1291
Score = 127 bits (318), Expect = 5e-31
Identities = 54/106 (50%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Frame = +2
Query: 2 ECILTATYIVHRFPSKVINDKTSYEVLFEQNPEYDHIRVFGCLAY*KNTETNGDEFEPRG 181
EC+LTATYI++R PS+ I +KT YE+LF+ P YDH++V GCLAY K + D+FE RG
Sbjct: 485 ECVLTATYIINRLPSRSIQNKTPYEILFKSKPSYDHMKVLGCLAYVKENKARKDKFEERG 544
Query: 182 KPGVFLGYPPGKKG-*IYDLEQRKMVITRDARFIEEMFPFSKAEPK 316
+P VF+GYP GKKG ++D++ + ++++RD +F+E +FPF E K
Sbjct: 545 RPCVFVGYPQGKKGYRVFDIQNKGIIVSRDVKFVEGIFPFQNIEDK 590
>ref|XP_017415205.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X3 [Vigna angularis]
Length = 982
Score = 114 bits (284), Expect = 2e-26
Identities = 58/144 (40%), Positives = 88/144 (61%), Gaps = 2/144 (1%)
Frame = +2
Query: 2 ECILTATYIVHRFPSKVINDKTSYEVLFEQNPEYDHIRVFGCLAY*KNTETNGDEFEPRG 181
ECILTA Y+++R PS ++ KT YE++ P YDH+RVFGCL Y N + NGD+F R
Sbjct: 219 ECILTAGYLINRTPSTILQGKTPYEIVNGNPPTYDHLRVFGCLCYAHNQDRNGDKFASRS 278
Query: 182 KPGVFLGYPPGKKG-*IYDLEQRKMVITRDARFIEEMFPFSKAEPKVFEQEIFECSSP-I 355
+ VF+GY G+KG ++DLE+ ++RD +F+E FPF+ + +E E P I
Sbjct: 279 RKSVFVGYSAGQKGWKLFDLEREVFWVSRDVKFVENEFPFA----SLIHKEPSEMKLPFI 334
Query: 356 SQNDEPHEEPAKNIEKNEEQTHSM 427
+ E H+E I++N+ T ++
Sbjct: 335 NAGVENHDEHIVEIDENDPTTETV 358
>ref|XP_017415203.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X2 [Vigna angularis]
Length = 1435
Score = 114 bits (284), Expect = 2e-26
Identities = 58/144 (40%), Positives = 88/144 (61%), Gaps = 2/144 (1%)
Frame = +2
Query: 2 ECILTATYIVHRFPSKVINDKTSYEVLFEQNPEYDHIRVFGCLAY*KNTETNGDEFEPRG 181
ECILTA Y+++R PS ++ KT YE++ P YDH+RVFGCL Y N + NGD+F R
Sbjct: 672 ECILTAGYLINRTPSTILQGKTPYEIVNGNPPTYDHLRVFGCLCYAHNQDRNGDKFASRS 731
Query: 182 KPGVFLGYPPGKKG-*IYDLEQRKMVITRDARFIEEMFPFSKAEPKVFEQEIFECSSP-I 355
+ VF+GY G+KG ++DLE+ ++RD +F+E FPF+ + +E E P I
Sbjct: 732 RKSVFVGYSAGQKGWKLFDLEREVFWVSRDVKFVENEFPFA----SLIHKEPSEMKLPFI 787
Query: 356 SQNDEPHEEPAKNIEKNEEQTHSM 427
+ E H+E I++N+ T ++
Sbjct: 788 NAGVENHDEHIVEIDENDPTTETV 811
>ref|XP_017415202.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X1 [Vigna angularis]
Length = 1472
Score = 114 bits (284), Expect = 2e-26
Identities = 58/144 (40%), Positives = 88/144 (61%), Gaps = 2/144 (1%)
Frame = +2
Query: 2 ECILTATYIVHRFPSKVINDKTSYEVLFEQNPEYDHIRVFGCLAY*KNTETNGDEFEPRG 181
ECILTA Y+++R PS ++ KT YE++ P YDH+RVFGCL Y N + NGD+F R
Sbjct: 709 ECILTAGYLINRTPSTILQGKTPYEIVNGNPPTYDHLRVFGCLCYAHNQDRNGDKFASRS 768
Query: 182 KPGVFLGYPPGKKG-*IYDLEQRKMVITRDARFIEEMFPFSKAEPKVFEQEIFECSSP-I 355
+ VF+GY G+KG ++DLE+ ++RD +F+E FPF+ + +E E P I
Sbjct: 769 RKSVFVGYSAGQKGWKLFDLEREVFWVSRDVKFVENEFPFA----SLIHKEPSEMKLPFI 824
Query: 356 SQNDEPHEEPAKNIEKNEEQTHSM 427
+ E H+E I++N+ T ++
Sbjct: 825 NAGVENHDEHIVEIDENDPTTETV 848
>ref|XP_019252834.1| PREDICTED: uncharacterized protein LOC109231642 [Nicotiana
attenuata]
Length = 871
Score = 113 bits (283), Expect = 2e-26
Identities = 51/103 (49%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
Frame = +2
Query: 2 ECILTATYIVHRFPSKVINDKTSYEVLFEQNPEYDHIRVFGCLAY*KNTETNGDEFEPRG 181
ECILTAT++++RFPS+V+ KT YE+LF + P Y ++ FGCL Y N +FEPR
Sbjct: 580 ECILTATFLINRFPSRVLQGKTPYELLFSEPPSYHFLKSFGCLCYVSTLSHNRSKFEPRA 639
Query: 182 KPGVFLGYPPGKKG-*IYDLEQRKMVITRDARFIEEMFPFSKA 307
K VFLGYP G+KG + D+E +K+ ++RD +F E++FPFS +
Sbjct: 640 KACVFLGYPTGQKGYKVLDVETKKVFVSRDVKFCEDIFPFSSS 682
>gb|PNY12475.1| retroelement pol polyprotein-like [Trifolium pratense]
Length = 1423
Score = 113 bits (283), Expect = 3e-26
Identities = 61/143 (42%), Positives = 89/143 (62%), Gaps = 7/143 (4%)
Frame = +2
Query: 2 ECILTATYIVHRFPSKVINDKTSYEVLFEQNPEYDHIRVFGCLAY*KNTETNGDEFEPRG 181
EC+LTA Y+++R P+ +++ KT +E+L Q P Y+H+RVFG L Y N GD+F R
Sbjct: 690 ECVLTAGYLINRTPTPLLDGKTPFEMLNGQPPLYEHLRVFGSLCYAHNQGKKGDKFTSRS 749
Query: 182 KPGVFLGYPPGKKG-*IYDLEQRKMVITRDARFIEEMFPFSK-----AEP-KVFEQEIFE 340
K VF+GYPPGKKG ++DL+++K ++RD F E FPF+ +EP + FE E FE
Sbjct: 750 KKCVFVGYPPGKKGWKLFDLDEKKYFVSRDVAFFENEFPFATVVKTLSEPTRSFENENFE 809
Query: 341 CSSPISQNDEPHEEPAKNIEKNE 409
S S+ H+E +E +E
Sbjct: 810 TQSVASE----HQEAPLEVESSE 828
>ref|XP_021746631.1| uncharacterized protein LOC110712474 [Chenopodium quinoa]
Length = 947
Score = 112 bits (279), Expect = 8e-26
Identities = 51/128 (39%), Positives = 83/128 (64%), Gaps = 1/128 (0%)
Frame = +2
Query: 2 ECILTATYIVHRFPSKVINDKTSYEVLFEQNPEYDHIRVFGCLAY*KNTETNGDEFEPRG 181
EC+L A ++++R P+ ++ +KT +E+LF++ P +D IR FGCL + N +TNGD+F R
Sbjct: 651 ECVLAAAHLINRTPTPLLQNKTPFEILFDKPPMFDAIRTFGCLCFAHNQKTNGDKFASRS 710
Query: 182 KPGVFLGYPPGKKG-*IYDLEQRKMVITRDARFIEEMFPFSKAEPKVFEQEIFECSSPIS 358
+ VF+GYP GKKG +YDLE + ++RD +FIE++FPF+ E E +++ +
Sbjct: 711 RKCVFVGYPFGKKGWRLYDLEAKVFFVSRDVKFIEDVFPFATPEDVNIEPHVYDSGYNVH 770
Query: 359 QNDEPHEE 382
+ EE
Sbjct: 771 DDFVEFEE 778
>gb|OMO90088.1| Integrase, catalytic core [Corchorus capsularis]
Length = 1161
Score = 111 bits (278), Expect = 1e-25
Identities = 53/136 (38%), Positives = 83/136 (61%), Gaps = 1/136 (0%)
Frame = +2
Query: 2 ECILTATYIVHRFPSKVINDKTSYEVLFEQNPEYDHIRVFGCLAY*KNTETNGDEFEPRG 181
EC+LTA Y+++ P+ +N KT YE L +++P+YDH+RVFGCL Y + +GD+F PR
Sbjct: 513 ECVLTAAYLINITPTPKLNGKTPYEALLKKSPKYDHLRVFGCLCYVHDINRSGDKFSPRA 572
Query: 182 KPGVFLGYPPGKKG-*IYDLEQRKMVITRDARFIEEMFPFSKAEPKVFEQEIFECSSPIS 358
+F+GYP GKK +YDLE K++++RD F E +FPFS + + +P+
Sbjct: 573 HRCIFIGYPLGKKAYQVYDLESHKIMVSRDVIFYENIFPFSMSAKESHPLPSHVSKNPVF 632
Query: 359 QNDEPHEEPAKNIEKN 406
D + P +++N
Sbjct: 633 LED---DHPFVTVDQN 645
>dbj|GAU21017.1| hypothetical protein TSUD_201660 [Trifolium subterraneum]
Length = 1252
Score = 111 bits (278), Expect = 1e-25
Identities = 52/103 (50%), Positives = 71/103 (68%), Gaps = 1/103 (0%)
Frame = +2
Query: 2 ECILTATYIVHRFPSKVINDKTSYEVLFEQNPEYDHIRVFGCLAY*KNTETNGDEFEPRG 181
ECIL A Y+++R PS V+N KT YE+L+ ++P H+RVFGCL Y N + GD+FE R
Sbjct: 486 ECILAAGYLINRTPSSVLNGKTPYEMLYGKSPSLTHLRVFGCLCYVHNQDRRGDKFESRS 545
Query: 182 KPGVFLGYPPGKKG-*IYDLEQRKMVITRDARFIEEMFPFSKA 307
+ +F+GYP GKKG +YDLE +I+RD F E+ FPF K+
Sbjct: 546 RKCIFVGYPYGKKGWRVYDLETSAFLISRDVVFCEDKFPFHKS 588
>ref|XP_021867405.1| uncharacterized protein LOC110806076 [Spinacia oleracea]
Length = 704
Score = 111 bits (277), Expect = 1e-25
Identities = 49/100 (49%), Positives = 73/100 (73%), Gaps = 1/100 (1%)
Frame = +2
Query: 2 ECILTATYIVHRFPSKVINDKTSYEVLFEQNPEYDHIRVFGCLAY*KNTETNGDEFEPRG 181
EC+L A ++++R PS V+ +KTS+E+LF + P YD IR+FGCL + N +T GD+FE R
Sbjct: 433 ECVLAAAHLINRTPSSVLQNKTSFEILFGRPPSYDSIRIFGCLCFAHNQKTRGDKFESRS 492
Query: 182 KPGVFLGYPPGKKG-*IYDLEQRKMVITRDARFIEEMFPF 298
+ VFLGYP GKKG ++DL+ ++ ++RD F E++FPF
Sbjct: 493 RKCVFLGYPFGKKGWNMFDLDTKEFFVSRDVTFFEDVFPF 532
>ref|XP_010692480.1| PREDICTED: uncharacterized protein LOC104905592 [Beta vulgaris subsp.
vulgaris]
Length = 1085
Score = 111 bits (277), Expect = 2e-25
Identities = 48/101 (47%), Positives = 74/101 (73%), Gaps = 1/101 (0%)
Frame = +2
Query: 2 ECILTATYIVHRFPSKVINDKTSYEVLFEQNPEYDHIRVFGCLAY*KNTETNGDEFEPRG 181
EC+LTA ++++R PS V+ +KT YE++F + PE+D +RVFGCL + N + GD+F PR
Sbjct: 709 ECVLTAVHLINRTPSGVLGNKTPYEMIFGELPEFDLLRVFGCLCFAHNQKAKGDKFAPRS 768
Query: 182 KPGVFLGYPPGKKG-*IYDLEQRKMVITRDARFIEEMFPFS 301
+ +F+GYP GKKG +YDLE + ++RD +F+EE FP++
Sbjct: 769 RKCIFIGYPTGKKGWKLYDLESGAIFVSRDVQFLEESFPYA 809
>gb|EOY05030.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma
cacao]
Length = 1141
Score = 110 bits (275), Expect = 3e-25
Identities = 48/99 (48%), Positives = 70/99 (70%), Gaps = 1/99 (1%)
Frame = +2
Query: 2 ECILTATYIVHRFPSKVINDKTSYEVLFEQNPEYDHIRVFGCLAY*KNTETNGDEFEPRG 181
EC+LTA Y+++R P V+ +KT YE+LF ++P Y H+R FGCL Y T + D+F P
Sbjct: 484 ECVLTAAYLINRMPLSVLKNKTPYEILFGRSPTYQHLRTFGCLCYGLITNKSRDKFTPCS 543
Query: 182 KPGVFLGYPPGKKG-*IYDLEQRKMVITRDARFIEEMFP 295
KPG+FLGYP G+KG I+D+E +K+ +RD +F + +FP
Sbjct: 544 KPGIFLGYPHGQKGYRIFDIEDKKIYTSRDVQFFKNIFP 582
>ref|XP_019261987.1| PREDICTED: uncharacterized protein LOC109239848 [Nicotiana
attenuata]
Length = 656
Score = 110 bits (274), Expect = 4e-25
Identities = 50/103 (48%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
Frame = +2
Query: 2 ECILTATYIVHRFPSKVINDKTSYEVLFEQNPEYDHIRVFGCLAY*KNTETNGDEFEPRG 181
ECILTAT++++RFPS+V+ KT YE+LF + Y ++ FGCL Y N +FEPR
Sbjct: 404 ECILTATFLINRFPSRVLQGKTPYEILFSEPRSYHFLKSFGCLCYVSTLSHNRSKFEPRE 463
Query: 182 KPGVFLGYPPGKKG-*IYDLEQRKMVITRDARFIEEMFPFSKA 307
K VFLGYP G+KG + D+E +K+ ++RD +F E++FPFS +
Sbjct: 464 KACVFLGYPTGQKGYKVLDVETKKVFVSRDVKFCEDIFPFSSS 506
>ref|XP_016442574.1| PREDICTED: uncharacterized protein LOC107767985 [Nicotiana tabacum]
Length = 1017
Score = 110 bits (274), Expect = 4e-25
Identities = 58/140 (41%), Positives = 82/140 (58%), Gaps = 10/140 (7%)
Frame = +2
Query: 2 ECILTATYIVHRFPSKVINDKTSYEVLFEQNPEYDHIRVFGCLAY*KNTETNGDEFEPRG 181
ECILTAT++++RFPSKV+ KT YEVLF + P Y+ +R FGCL Y + +F+PR
Sbjct: 318 ECILTATFLINRFPSKVLKGKTPYEVLFGKAPTYEILRSFGCLCYVSTLSQHRSKFDPRA 377
Query: 182 KPGVFLGYPPGKKG-*IYDLEQRKMVITRDARFIEEMFPFSKAEPKVFEQEIFECS---- 346
K VFLGY G+KG + D++ R++ ++RD F EE+FPF A + S
Sbjct: 378 KSCVFLGYAQGQKGYKVLDMDTRRVFVSRDIMFHEEVFPFHLAHSSTYYPHCSTFSTDPS 437
Query: 347 --SPISQND---EPHEEPAK 391
SP+ Q PH P++
Sbjct: 438 AESPVHQQQPVLSPHSSPSR 457
>gb|PNX92993.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 1472
Score = 110 bits (274), Expect = 4e-25
Identities = 52/123 (42%), Positives = 78/123 (63%), Gaps = 7/123 (5%)
Frame = +2
Query: 2 ECILTATYIVHRFPSKVINDKTSYEVLFEQNPEYDHIRVFGCLAY*KNTETNGDEFEPRG 181
ECIL A Y+++R PS ++N KT +E+L+ ++P H+RVFGCL Y N + GD+FE R
Sbjct: 706 ECILAAGYLINRTPSSILNGKTPFELLYGKSPPLTHLRVFGCLCYVHNQDRRGDKFESRS 765
Query: 182 KPGVFLGYPPGKKG-*IYDLEQRKMVITRDARFIEEMFPFSK------AEPKVFEQEIFE 340
+ +F+GYP GKKG +YDLE +I+RD F E+ FPF K ++P + ++
Sbjct: 766 RRCIFVGYPYGKKGWRVYDLETSAFLISRDVVFCEDTFPFHKSLNHPMSQPSTADMWTYD 825
Query: 341 CSS 349
C +
Sbjct: 826 CDN 828