BLASTX nr result

ID: Chrysanthemum21_contig00011710 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00011710
         (418 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023734333.1| pre-mRNA-splicing factor ATP-dependent RNA h...    97   2e-20
ref|XP_023734329.1| pre-mRNA-splicing factor ATP-dependent RNA h...    97   2e-20
gb|OTG16323.1| putative RNA helicase family protein [Helianthus ...    81   6e-15
ref|XP_021983844.1| pre-mRNA-splicing factor ATP-dependent RNA h...    81   6e-15
gb|KVI06410.1| DNA/RNA helicase, ATP-dependent, DEAH-box type, c...    78   5e-14
ref|XP_021989609.1| pre-mRNA-splicing factor ATP-dependent RNA h...    78   7e-14
ref|XP_021989607.1| pre-mRNA-splicing factor ATP-dependent RNA h...    78   7e-14
ref|XP_017637620.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    75   4e-13
gb|KHG22113.1| Putative pre-mRNA-splicing factor ATP-dependent R...    75   4e-13
gb|KDO54600.1| hypothetical protein CISIN_1g024716mg [Citrus sin...    71   2e-12
gb|KDO54598.1| hypothetical protein CISIN_1g024716mg [Citrus sin...    71   4e-12
ref|XP_016741697.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    72   5e-12
gb|PIN17313.1| mRNA splicing factor ATP-dependent RNA helicase [...    72   5e-12
ref|XP_010262605.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    72   5e-12
emb|CBI15151.3| unnamed protein product, partial [Vitis vinifera]      72   7e-12
ref|XP_021287241.1| pre-mRNA-splicing factor ATP-dependent RNA h...    72   7e-12
ref|XP_021287240.1| pre-mRNA-splicing factor ATP-dependent RNA h...    72   7e-12
ref|XP_002284415.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    72   7e-12
ref|XP_011087322.1| pre-mRNA-splicing factor ATP-dependent RNA h...    72   9e-12
ref|XP_006345152.1| PREDICTED: putative pre-mRNA-splicing factor...    71   1e-11

>ref|XP_023734333.1| pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like
           isoform X4 [Lactuca sativa]
          Length = 897

 Score = 96.7 bits (239), Expect = 2e-20
 Identities = 56/93 (60%), Positives = 70/93 (75%), Gaps = 5/93 (5%)
 Frame = -1

Query: 418 RKVVHKATRTNLYIQLEQEASRLARKQKSYKVLQACNDEE--ND--GSGYVASQSKKTDK 251
           +KV HK++ +NLY Q E+EA+ LARKQ+SYK+L+  +D++  ND  GS  VA+QSKK DK
Sbjct: 65  QKVEHKSSGSNLYRQQEEEAAMLARKQRSYKLLEGDDDDDDKNDHGGSVSVATQSKKVDK 124

Query: 250 RVKRFRKKSENQIDA-DDEGVGHLRQE*RAKNK 155
            VKRFRKKSENQ D  DDEG G L+QE R K K
Sbjct: 125 HVKRFRKKSENQEDEDDDEGAGILKQERRVKQK 157


>ref|XP_023734329.1| pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like
           isoform X1 [Lactuca sativa]
 ref|XP_023734330.1| pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like
           isoform X1 [Lactuca sativa]
          Length = 1051

 Score = 96.7 bits (239), Expect = 2e-20
 Identities = 56/93 (60%), Positives = 70/93 (75%), Gaps = 5/93 (5%)
 Frame = -1

Query: 418 RKVVHKATRTNLYIQLEQEASRLARKQKSYKVLQACNDEE--ND--GSGYVASQSKKTDK 251
           +KV HK++ +NLY Q E+EA+ LARKQ+SYK+L+  +D++  ND  GS  VA+QSKK DK
Sbjct: 65  QKVEHKSSGSNLYRQQEEEAAMLARKQRSYKLLEGDDDDDDKNDHGGSVSVATQSKKVDK 124

Query: 250 RVKRFRKKSENQIDA-DDEGVGHLRQE*RAKNK 155
            VKRFRKKSENQ D  DDEG G L+QE R K K
Sbjct: 125 HVKRFRKKSENQEDEDDDEGAGILKQERRVKQK 157


>gb|OTG16323.1| putative RNA helicase family protein [Helianthus annuus]
          Length = 1030

 Score = 80.9 bits (198), Expect = 6e-15
 Identities = 43/89 (48%), Positives = 64/89 (71%)
 Frame = -1

Query: 418 RKVVHKATRTNLYIQLEQEASRLARKQKSYKVLQACNDEENDGSGYVASQSKKTDKRVKR 239
           RKV HK++  NLY Q E+ A++LAR+Q++YK+L+  +D+++ G    + +SKK DK+ K 
Sbjct: 52  RKVEHKSSGPNLYRQEEEAAAKLARQQRTYKLLE--DDDDDGGEPGNSVKSKKKDKKEKS 109

Query: 238 FRKKSENQIDADDEGVGHLRQE*RAKNKL 152
           FRKKSE Q D DDEG  +L++E R K K+
Sbjct: 110 FRKKSEIQEDEDDEGAVNLKEERRVKQKV 138


>ref|XP_021983844.1| pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like
           [Helianthus annuus]
          Length = 1043

 Score = 80.9 bits (198), Expect = 6e-15
 Identities = 43/89 (48%), Positives = 64/89 (71%)
 Frame = -1

Query: 418 RKVVHKATRTNLYIQLEQEASRLARKQKSYKVLQACNDEENDGSGYVASQSKKTDKRVKR 239
           RKV HK++  NLY Q E+ A++LAR+Q++YK+L+  +D+++ G    + +SKK DK+ K 
Sbjct: 65  RKVEHKSSGPNLYRQEEEAAAKLARQQRTYKLLE--DDDDDGGEPGNSVKSKKKDKKEKS 122

Query: 238 FRKKSENQIDADDEGVGHLRQE*RAKNKL 152
           FRKKSE Q D DDEG  +L++E R K K+
Sbjct: 123 FRKKSEIQEDEDDEGAVNLKEERRVKQKV 151


>gb|KVI06410.1| DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved
           site-containing protein [Cynara cardunculus var.
           scolymus]
          Length = 1140

 Score = 78.2 bits (191), Expect = 5e-14
 Identities = 47/103 (45%), Positives = 63/103 (61%), Gaps = 22/103 (21%)
 Frame = -1

Query: 382 YIQLEQEASRLARKQKSYKVLQACNDEEND---GSGYVASQSKKTDKRVKRFRKKSENQI 212
           Y Q E+EA+ LA+KQ++YK+L+A +D+END   GS  VA QSKK DKR KRFRKK+ENQ 
Sbjct: 151 YRQQEEEAAMLAKKQRTYKLLEADDDDENDERNGSISVAPQSKKADKRAKRFRKKTENQE 210

Query: 211 DADDE-------------------GVGHLRQE*RAKNKLAMKQ 140
           D D+E                   G G L++E R K K + ++
Sbjct: 211 DEDNEAYCFCWFGASYNDLLLLITGAGILKEERRVKQKASREE 253


>ref|XP_021989609.1| pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like
           isoform X2 [Helianthus annuus]
          Length = 1000

 Score = 77.8 bits (190), Expect = 7e-14
 Identities = 40/90 (44%), Positives = 61/90 (67%)
 Frame = -1

Query: 418 RKVVHKATRTNLYIQLEQEASRLARKQKSYKVLQACNDEENDGSGYVASQSKKTDKRVKR 239
           RKV HK++ +N+Y Q E+ A+ LARKQ++YK+L   +DE  +    V  +SKKTDK+ K 
Sbjct: 65  RKVEHKSSGSNVYRQREEAAAMLARKQRNYKLLADADDESGEHGSSV--KSKKTDKKAKS 122

Query: 238 FRKKSENQIDADDEGVGHLRQE*RAKNKLA 149
           FRKK E + D DDEG  +L+++   + K++
Sbjct: 123 FRKKRETKEDEDDEGAVNLKEDRLVRQKVS 152


>ref|XP_021989607.1| pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like
           isoform X1 [Helianthus annuus]
 ref|XP_021989608.1| pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like
           isoform X1 [Helianthus annuus]
 gb|OTG12347.1| putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
           [Helianthus annuus]
          Length = 1003

 Score = 77.8 bits (190), Expect = 7e-14
 Identities = 40/90 (44%), Positives = 61/90 (67%)
 Frame = -1

Query: 418 RKVVHKATRTNLYIQLEQEASRLARKQKSYKVLQACNDEENDGSGYVASQSKKTDKRVKR 239
           RKV HK++ +N+Y Q E+ A+ LARKQ++YK+L   +DE  +    V  +SKKTDK+ K 
Sbjct: 68  RKVEHKSSGSNVYRQREEAAAMLARKQRNYKLLADADDESGEHGSSV--KSKKTDKKAKS 125

Query: 238 FRKKSENQIDADDEGVGHLRQE*RAKNKLA 149
           FRKK E + D DDEG  +L+++   + K++
Sbjct: 126 FRKKRETKEDEDDEGAVNLKEDRLVRQKVS 155


>ref|XP_017637620.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           DEAH1 [Gossypium arboreum]
          Length = 1067

 Score = 75.5 bits (184), Expect = 4e-13
 Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 9/96 (9%)
 Frame = -1

Query: 415 KVVHKATRTNLYIQLEQEASRLARKQKSYKVLQACNDEENDG---------SGYVASQSK 263
           KV HKA+R N Y + E+EA+  ARKQK+Y +L A ++EE  G         S   AS+++
Sbjct: 76  KVPHKASRENFYQKQEREAAVFARKQKTYALLDADDEEEEAGTNTSLHRLSSNEPASETR 135

Query: 262 KTDKRVKRFRKKSENQIDADDEGVGHLRQE*RAKNK 155
           K DK  KRFRKK+E++ D DDE V H+ ++ R K +
Sbjct: 136 KGDKHKKRFRKKNESEQDEDDEEVIHVDEKKRVKRQ 171


>gb|KHG22113.1| Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
           [Gossypium arboreum]
          Length = 1067

 Score = 75.5 bits (184), Expect = 4e-13
 Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 9/96 (9%)
 Frame = -1

Query: 415 KVVHKATRTNLYIQLEQEASRLARKQKSYKVLQACNDEENDG---------SGYVASQSK 263
           KV HKA+R N Y + E+EA+  ARKQK+Y +L A ++EE  G         S   AS+++
Sbjct: 76  KVPHKASRENFYQKQEREAAVFARKQKTYALLDADDEEEEAGTNTSLHRLSSNEPASETR 135

Query: 262 KTDKRVKRFRKKSENQIDADDEGVGHLRQE*RAKNK 155
           K DK  KRFRKK+E++ D DDE V H+ ++ R K +
Sbjct: 136 KGDKHKKRFRKKNESEQDEDDEEVIHVDEKKRVKRQ 171


>gb|KDO54600.1| hypothetical protein CISIN_1g024716mg [Citrus sinensis]
          Length = 216

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
 Frame = -1

Query: 415 KVVHKATRTNLYIQLEQEASRLARKQKSYKVLQACNDEENDGSGY-------VASQSKKT 257
           +V  KA   NLY + E+EA+ L +KQK+Y +L A +D +++G          VAS+S+K+
Sbjct: 68  RVPRKAAGLNLYQKQEREAALLVKKQKTYTILDADDDADDNGGTAIVDDRPSVASESRKS 127

Query: 256 DKRVKRFRKKSENQIDADDEGVGHLRQE*RAKNKLAMKQM 137
            K  KRFRKK+  + D DDEG+ H+ QE R   +   K +
Sbjct: 128 TKEKKRFRKKTGVEDDDDDEGIAHVEQERRQVKRRTSKDI 167


>gb|KDO54598.1| hypothetical protein CISIN_1g024716mg [Citrus sinensis]
 gb|KDO54599.1| hypothetical protein CISIN_1g024716mg [Citrus sinensis]
          Length = 263

 Score = 71.2 bits (173), Expect = 4e-12
 Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
 Frame = -1

Query: 415 KVVHKATRTNLYIQLEQEASRLARKQKSYKVLQACNDEENDGSGY-------VASQSKKT 257
           +V  KA   NLY + E+EA+ L +KQK+Y +L A +D +++G          VAS+S+K+
Sbjct: 68  RVPRKAAGLNLYQKQEREAALLVKKQKTYTILDADDDADDNGGTAIVDDRPSVASESRKS 127

Query: 256 DKRVKRFRKKSENQIDADDEGVGHLRQE*RAKNKLAMKQM 137
            K  KRFRKK+  + D DDEG+ H+ QE R   +   K +
Sbjct: 128 TKEKKRFRKKTGVEDDDDDEGIAHVEQERRQVKRRTSKDI 167


>ref|XP_016741697.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           DEAH1 [Gossypium hirsutum]
          Length = 1016

 Score = 72.4 bits (176), Expect = 5e-12
 Identities = 42/96 (43%), Positives = 60/96 (62%), Gaps = 9/96 (9%)
 Frame = -1

Query: 415 KVVHKATRTNLYIQLEQEASRLARKQKSYKVLQACNDEENDG---------SGYVASQSK 263
           KV  KA+R N Y + E+EA+  ARKQK+Y +L A ++EE  G         S   AS+++
Sbjct: 76  KVPRKASRENFYQKQEREAAVFARKQKTYALLDADDEEEEAGTNTSLHRLSSNEPASETR 135

Query: 262 KTDKRVKRFRKKSENQIDADDEGVGHLRQE*RAKNK 155
           K DK  KRFRKK+E++ D DDE V H+ ++ R K +
Sbjct: 136 KGDKHKKRFRKKNESEQDEDDEEVIHVDEKKRVKRQ 171


>gb|PIN17313.1| mRNA splicing factor ATP-dependent RNA helicase [Handroanthus
           impetiginosus]
          Length = 1042

 Score = 72.4 bits (176), Expect = 5e-12
 Identities = 41/87 (47%), Positives = 59/87 (67%)
 Frame = -1

Query: 415 KVVHKATRTNLYIQLEQEASRLARKQKSYKVLQACNDEENDGSGYVASQSKKTDKRVKRF 236
           +V HKA+ TNLY Q E+EA+ LARKQK+YK+L+A   ++ D    VA   KK + R K+F
Sbjct: 65  RVEHKASGTNLYKQQEREAAILARKQKTYKLLEA---DDEDDEVPVAPLPKKEETRSKKF 121

Query: 235 RKKSENQIDADDEGVGHLRQE*RAKNK 155
           RK++E Q D DDE + +  QE R +++
Sbjct: 122 RKRTEIQDDGDDEVLKNAGQERRVRSR 148


>ref|XP_010262605.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           DEAH1-like isoform X1 [Nelumbo nucifera]
 ref|XP_010262606.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           DEAH1-like isoform X1 [Nelumbo nucifera]
          Length = 1050

 Score = 72.4 bits (176), Expect = 5e-12
 Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
 Frame = -1

Query: 415 KVVHKATRTNLYIQLEQEASRLARKQKSYKVLQACNDEENDG-----SGYVASQSKKTDK 251
           KV HK +  NLY + E+EA+ L RKQKSY +L   ND+ ++G     S  ++SQSK+ D 
Sbjct: 68  KVPHKTSGLNLYQKQEKEAAMLVRKQKSYAILDDDNDDGDNGDHQVSSTVISSQSKRVDS 127

Query: 250 RVKRFRKKSENQIDADDEGVGHLRQE*RAKNKLA 149
           R K FRKK+E+  D DDE      QE   + +++
Sbjct: 128 RQKHFRKKTEDPDDDDDEVTAKEEQERHVRRRIS 161


>emb|CBI15151.3| unnamed protein product, partial [Vitis vinifera]
          Length = 954

 Score = 72.0 bits (175), Expect = 7e-12
 Identities = 43/103 (41%), Positives = 61/103 (59%), Gaps = 11/103 (10%)
 Frame = -1

Query: 415 KVVHKATRTNLYIQLEQEASRLARKQKSYKVLQACNDEENDGSGYV----------ASQS 266
           KV HKA+  N+Y + E+EA+ L RKQK+Y +L A +D + DG G V          ASQS
Sbjct: 68  KVPHKASGLNVYQKQEREAAMLVRKQKTYAILDA-DDSDEDGGGIVDNRSSTAAPAASQS 126

Query: 265 KKTDKRVKRFRKKSEN-QIDADDEGVGHLRQE*RAKNKLAMKQ 140
           +K D   KRFRKK+EN + DADDE +    +  + K + +  +
Sbjct: 127 EKADTHKKRFRKKTENVEDDADDEVIARAEESRQVKRRTSQDE 169


>ref|XP_021287241.1| pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like
           isoform X2 [Herrania umbratica]
          Length = 1054

 Score = 72.0 bits (175), Expect = 7e-12
 Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 9/101 (8%)
 Frame = -1

Query: 415 KVVHKATRTNLYIQLEQEASRLARKQKSYKVLQACNDEENDG---------SGYVASQSK 263
           +V  KA+  NLY + E+EA+ LARKQK+Y +L A ++E++ G         S    S+++
Sbjct: 68  RVPRKASGENLYQKQEREAAFLARKQKTYAILDADDNEDDAGTSSSVHHHSSSEPISEAR 127

Query: 262 KTDKRVKRFRKKSENQIDADDEGVGHLRQE*RAKNKLAMKQ 140
           K DK  KRFRKK E++ D DDE + H+ +E R K + +  +
Sbjct: 128 KADKHKKRFRKKIESEEDEDDEVITHVEEERRVKRRTSQDE 168


>ref|XP_021287240.1| pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like
           isoform X1 [Herrania umbratica]
          Length = 1056

 Score = 72.0 bits (175), Expect = 7e-12
 Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 9/101 (8%)
 Frame = -1

Query: 415 KVVHKATRTNLYIQLEQEASRLARKQKSYKVLQACNDEENDG---------SGYVASQSK 263
           +V  KA+  NLY + E+EA+ LARKQK+Y +L A ++E++ G         S    S+++
Sbjct: 70  RVPRKASGENLYQKQEREAAFLARKQKTYAILDADDNEDDAGTSSSVHHHSSSEPISEAR 129

Query: 262 KTDKRVKRFRKKSENQIDADDEGVGHLRQE*RAKNKLAMKQ 140
           K DK  KRFRKK E++ D DDE + H+ +E R K + +  +
Sbjct: 130 KADKHKKRFRKKIESEEDEDDEVITHVEEERRVKRRTSQDE 170


>ref|XP_002284415.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           DEAH1 [Vitis vinifera]
          Length = 1056

 Score = 72.0 bits (175), Expect = 7e-12
 Identities = 43/103 (41%), Positives = 61/103 (59%), Gaps = 11/103 (10%)
 Frame = -1

Query: 415 KVVHKATRTNLYIQLEQEASRLARKQKSYKVLQACNDEENDGSGYV----------ASQS 266
           KV HKA+  N+Y + E+EA+ L RKQK+Y +L A +D + DG G V          ASQS
Sbjct: 68  KVPHKASGLNVYQKQEREAAMLVRKQKTYAILDA-DDSDEDGGGIVDNRSSTAAPAASQS 126

Query: 265 KKTDKRVKRFRKKSEN-QIDADDEGVGHLRQE*RAKNKLAMKQ 140
           +K D   KRFRKK+EN + DADDE +    +  + K + +  +
Sbjct: 127 EKADTHKKRFRKKTENVEDDADDEVIARAEESRQVKRRTSQDE 169


>ref|XP_011087322.1| pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform
           X1 [Sesamum indicum]
          Length = 1042

 Score = 71.6 bits (174), Expect = 9e-12
 Identities = 41/87 (47%), Positives = 58/87 (66%)
 Frame = -1

Query: 415 KVVHKATRTNLYIQLEQEASRLARKQKSYKVLQACNDEENDGSGYVASQSKKTDKRVKRF 236
           +V HK +  NLY Q E+EA+ LARKQK+YK+L+A  D+ +D    V S +KK + R K+F
Sbjct: 65  RVEHKTSGPNLYQQQEREAAILARKQKTYKILEA--DDGSDDMVPVVSLTKKEETRSKKF 122

Query: 235 RKKSENQIDADDEGVGHLRQE*RAKNK 155
           RK+SE + D D+E V    QE R K++
Sbjct: 123 RKRSETEDDIDEEVVKKGAQERRVKSR 149


>ref|XP_006345152.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16 isoform X1 [Solanum tuberosum]
          Length = 1050

 Score = 71.2 bits (173), Expect = 1e-11
 Identities = 40/95 (42%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
 Frame = -1

Query: 415 KVVHKATRTNLYIQLEQEASRLARKQKSYKVLQACNDEEN---DGSGYVASQSKKTDKRV 245
           +V  K T  NLY+Q E+EA+ LARKQK+Y +L+A +++EN     S  V SQ++K D R 
Sbjct: 67  RVERKTTGPNLYLQQEREAAMLARKQKTYSLLEADDEDENIVGVESNSVPSQTRKEDTRT 126

Query: 244 KRFRKKSENQIDADDEGVGHLRQE*RAKNKLAMKQ 140
           K+FRK+ E   D DDE V     + R + + +  Q
Sbjct: 127 KKFRKRVETHEDEDDEVVRDEEDDRRVRRRTSQDQ 161


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