BLASTX nr result

ID: Cheilocostus21_contig00049859 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00049859
         (1043 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018678324.1| PREDICTED: pumilio homolog 2-like isoform X1...   147   2e-35
ref|XP_009393026.1| PREDICTED: pumilio homolog 2-like isoform X2...   135   2e-31
ref|XP_018676385.1| PREDICTED: pumilio homolog 3-like [Musa acum...   114   4e-24
ref|XP_009392359.1| PREDICTED: putative pumilio homolog 7, chlor...   100   1e-19

>ref|XP_018678324.1| PREDICTED: pumilio homolog 2-like isoform X1 [Musa acuminata subsp.
           malaccensis]
          Length = 890

 Score =  147 bits (371), Expect = 2e-35
 Identities = 103/255 (40%), Positives = 133/255 (52%), Gaps = 8/255 (3%)
 Frame = -2

Query: 742 RPFCYNMEAGKIDQYYDEVDKLLGEIPNSTAGNPYATVSIQSGASPAFESIFVYE-XXXX 566
           RPFC NMEA K+DQ +DE+DKLLGEIP +T GNPY    IQ+GA+  FE I V E     
Sbjct: 32  RPFCPNMEAEKLDQDFDELDKLLGEIPTATIGNPYTRKHIQNGAALDFELISVNEVEKTS 91

Query: 565 XXXXXXXSDYTPEAIKDAKKNNVEGN-ASSETLFGLEDNSSYRHEALTTNVNQNASSLPD 389
                     T  A+KD +  + +   +SS+T F  ED     H   TT  +QN ++LPD
Sbjct: 92  TPGDLYGMSCTTLAVKDCEIISADDTLSSSKTPFDQEDGPRSYHGTSTTITDQNTTNLPD 151

Query: 388 ERSLALALGDLSFKDTIDANLANPADLVYPFLENSQSSFNNHFSLGGNYTARSNKFSPKS 209
           E+SLA A  DL F D I A    P    YP      SS N+     G+ +      S   
Sbjct: 152 EQSLASAFEDLGFMDKIAAVSTTPYFKCYP------SSSNHALLPDGHCSENLENSSGLE 205

Query: 208 EERPTTLPHSMLSE-VQLLNLKSEGYSPLMTSSKPNMHSGTLDGNHDARLFKANFHDP-- 38
               + LP S+    V + N  SEG SP +T   P++ +G +DG+ DARL K NFHDP  
Sbjct: 206 SAEMSILPLSIRQNGVCVPNPASEGCSPFVTKDAPSILNGMVDGHDDARLLKLNFHDPRN 265

Query: 37  ---KSVLGDHKDQWQ 2
              KSV G+  +Q Q
Sbjct: 266 QMSKSVFGECGEQRQ 280


>ref|XP_009393026.1| PREDICTED: pumilio homolog 2-like isoform X2 [Musa acuminata subsp.
           malaccensis]
 ref|XP_009393027.1| PREDICTED: pumilio homolog 2-like isoform X2 [Musa acuminata subsp.
           malaccensis]
 ref|XP_018678325.1| PREDICTED: pumilio homolog 2-like isoform X2 [Musa acuminata subsp.
           malaccensis]
          Length = 853

 Score =  135 bits (341), Expect = 2e-31
 Identities = 98/249 (39%), Positives = 128/249 (51%), Gaps = 8/249 (3%)
 Frame = -2

Query: 724 MEAGKIDQYYDEVDKLLGEIPNSTAGNPYATVSIQSGASPAFESIFVYE-XXXXXXXXXX 548
           MEA K+DQ +DE+DKLLGEIP +T GNPY    IQ+GA+  FE I V E           
Sbjct: 1   MEAEKLDQDFDELDKLLGEIPTATIGNPYTRKHIQNGAALDFELISVNEVEKTSTPGDLY 60

Query: 547 XSDYTPEAIKDAKKNNVEGN-ASSETLFGLEDNSSYRHEALTTNVNQNASSLPDERSLAL 371
               T  A+KD +  + +   +SS+T F  ED     H   TT  +QN ++LPDE+SLA 
Sbjct: 61  GMSCTTLAVKDCEIISADDTLSSSKTPFDQEDGPRSYHGTSTTITDQNTTNLPDEQSLAS 120

Query: 370 ALGDLSFKDTIDANLANPADLVYPFLENSQSSFNNHFSLGGNYTARSNKFSPKSEERPTT 191
           A  DL F D I A    P    YP      SS N+     G+ +      S       + 
Sbjct: 121 AFEDLGFMDKIAAVSTTPYFKCYP------SSSNHALLPDGHCSENLENSSGLESAEMSI 174

Query: 190 LPHSMLSE-VQLLNLKSEGYSPLMTSSKPNMHSGTLDGNHDARLFKANFHDP-----KSV 29
           LP S+    V + N  SEG SP +T   P++ +G +DG+ DARL K NFHDP     KSV
Sbjct: 175 LPLSIRQNGVCVPNPASEGCSPFVTKDAPSILNGMVDGHDDARLLKLNFHDPRNQMSKSV 234

Query: 28  LGDHKDQWQ 2
            G+  +Q Q
Sbjct: 235 FGECGEQRQ 243


>ref|XP_018676385.1| PREDICTED: pumilio homolog 3-like [Musa acuminata subsp.
           malaccensis]
 ref|XP_018676387.1| PREDICTED: pumilio homolog 3-like [Musa acuminata subsp.
           malaccensis]
          Length = 823

 Score =  114 bits (285), Expect = 4e-24
 Identities = 86/246 (34%), Positives = 124/246 (50%), Gaps = 6/246 (2%)
 Frame = -2

Query: 724 MEAGKIDQYYDEVDKLLGEIPNSTAGNPYATVSIQSGASPAFESIFVYEXXXXXXXXXXX 545
           MEAG  ++   E DK+L E P++T G      SIQ      FE I ++E           
Sbjct: 1   MEAGATNEDCHEFDKILEETPDATTGYTCTRESIQG-----FEPISLFEVRRSSASSYLR 55

Query: 544 SDY-TPEAIKDAKKNNVEGNAS-SETLFGLEDNSSYRHEALTTNVNQNASSLPDERSLAL 371
             + T +A KD    + + N + S+     +D+    H  LT NV+Q+ASSLPD++SL  
Sbjct: 56  DPFSTLQAWKDYDIISSDDNFTMSKAPSDQKDDFHDYHGTLTVNVDQDASSLPDDQSLTS 115

Query: 370 ALGDLSFKDTIDANLANPADLVYPFLENSQSSFNNHFSLGGNYTARSNKFSPKSEERPTT 191
           A   +SF+D I +N +N       FLE++QSS ++  SL GN TA  NK     +     
Sbjct: 116 AFQVMSFQDRIASNSSNT------FLEHNQSSVSHALSLDGNQTACLNKCFSGLDSTERV 169

Query: 190 LPHSMLSEVQLLNLKSEGYSPLMTSSKPNMHSGTLDGNHDARLFKANFHDPK----SVLG 23
               ML+   L N +S+GYS  +  + PN     +DG+HD R  K NFHD +    SVL 
Sbjct: 170 PSPGMLNGDCLPNPESQGYSAFIIKNVPNKQCRIVDGHHDVRSLKPNFHDSRSQVPSVLD 229

Query: 22  DHKDQW 5
             ++QW
Sbjct: 230 GRREQW 235


>ref|XP_009392359.1| PREDICTED: putative pumilio homolog 7, chloroplastic [Musa
           acuminata subsp. malaccensis]
          Length = 814

 Score =  100 bits (250), Expect = 1e-19
 Identities = 85/255 (33%), Positives = 115/255 (45%), Gaps = 14/255 (5%)
 Frame = -2

Query: 724 MEAGKIDQYYDEVDKLLGEIPNSTAGNPYATVSIQSG--ASPAFESIFVYEXXXXXXXXX 551
           ME GK DQ    V KL  +I NST  NPYA    +SG  ASP+ + I             
Sbjct: 1   MEKGKSDQDDHVVRKLNRQISNSTTRNPYAGEPFRSGGGASPSLDPI------------- 47

Query: 550 XXSDYTPEAIKDAKKNNVEGNASSETL-------FGLEDNSSYRHEALTTNVNQNASSLP 392
                    + D  KN+   N S  +           E NS     A T    Q+A + P
Sbjct: 48  ---------LSDEAKNSTSSNLSDPSNTQDVKCPLVQEANSGNHRRASTMTAGQDALNSP 98

Query: 391 DERSLALALGDLSFKDTIDANLANPADLVYPFLENSQSSFNNHFSLGGNYTARSNKFSPK 212
           D+RSLA A   +SFK  I+       DL  P  E++ +SF         +  +S+   P+
Sbjct: 99  DDRSLASAFKAMSFKKRIEF------DLTIPSFEHNPASFRYAVLHNSEHLNKSSSM-PE 151

Query: 211 SEERPTTLPHSMLSEVQLLNLKSEGYSPLMTSSKPNMHSGTLDGNHDARLFKANF----- 47
           S E P  +P +M + V L NL+++GYS  +T    +M + TLDG+ DA   K NF     
Sbjct: 152 SSEMPIRMP-TMPNGVDLPNLEAKGYSSFITRDDSSMCNRTLDGHCDASSCKLNFCAPRY 210

Query: 46  HDPKSVLGDHKDQWQ 2
             P SVL  H +QWQ
Sbjct: 211 QTPNSVLACHNEQWQ 225


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