BLASTX nr result

ID: Cheilocostus21_contig00049711 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00049711
         (421 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018676427.1| PREDICTED: DNA mismatch repair protein MLH3 ...   118   4e-28
ref|XP_008813336.1| PREDICTED: uncharacterized protein LOC103723...    68   2e-10
ref|XP_008813335.1| PREDICTED: DNA mismatch repair protein MLH3-...    68   2e-10
ref|XP_010935309.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch...    64   3e-09
ref|XP_010935306.1| PREDICTED: DNA mismatch repair protein MLH3-...    56   2e-06

>ref|XP_018676427.1| PREDICTED: DNA mismatch repair protein MLH3 [Musa acuminata subsp.
            malaccensis]
          Length = 1280

 Score =  118 bits (296), Expect = 4e-28
 Identities = 68/141 (48%), Positives = 92/141 (65%), Gaps = 1/141 (0%)
 Frame = -1

Query: 421  PAGIHPIKSCTVTKLDGNHSSNPMIKIHRCYPSNEIAFKDVHLSIKMNDEMSLFCPDTSD 242
            P+ I+P  +     LD N S +P+       PS+E+AF++V  S K+ND++SLF  D  D
Sbjct: 780  PSMIYPANN-----LDDNCSLHPISNTDISDPSDEVAFENVCASSKINDQISLFPSDILD 834

Query: 241  FSSTLHDFKPKFHA-QKGNVMDGNIWYEQQFQSRSLPMNYKERSRRSQSAPPFYRGKRKY 65
             S T   F PK    +K NV+ G++W E++FQS+ LP+ YKERSR SQSAPPFY+GK K+
Sbjct: 835  ISVTEKIFNPKLLTIEKDNVVVGSLWNEKEFQSQQLPLIYKERSR-SQSAPPFYKGKSKF 893

Query: 64   SLLCGCLTAVGATKPSFLDSK 2
            S+LCGCLT+V A   S   SK
Sbjct: 894  SVLCGCLTSVAAKNSSSAVSK 914


>ref|XP_008813336.1| PREDICTED: uncharacterized protein LOC103723997 isoform X2 [Phoenix
            dactylifera]
          Length = 1062

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 49/140 (35%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
 Frame = -1

Query: 412  IHPIKSCTVTKLDGNHSSNPMIKIHRCYPSNEIAFKDVHLSIKMNDEMSLFCPDTSDFSS 233
            I+P +     + D  + S+P   +H  + S+E  F DV L   +N E S    D+ +   
Sbjct: 734  IYPDEIWAKNRSDHEYCSSPKKDVHYGHLSDETTFGDVCLLDNLNHETSWLFSDSINVKR 793

Query: 232  TLHDFKPKFHAQKGNVMDGNI---WYEQQFQSRSLPMNYKERSRRSQSAPPFYRGKRKYS 62
            T  D   KF     +  D  +    +EQ F++  L   +K RSRRS SAPPFY+GK K+ 
Sbjct: 794  T--DGYSKFRVHPVHNHDKGVESSLHEQGFRNHVLSQAHKVRSRRSSSAPPFYKGKCKFF 851

Query: 61   LLCGCLTAVGATKPSFLDSK 2
             L  CLT     KP F  SK
Sbjct: 852  TL-NCLTKTAGKKPDFEFSK 870


>ref|XP_008813335.1| PREDICTED: DNA mismatch repair protein MLH3-like isoform X1 [Phoenix
            dactylifera]
 ref|XP_017702347.1| PREDICTED: DNA mismatch repair protein MLH3-like isoform X1 [Phoenix
            dactylifera]
          Length = 1125

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 49/140 (35%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
 Frame = -1

Query: 412  IHPIKSCTVTKLDGNHSSNPMIKIHRCYPSNEIAFKDVHLSIKMNDEMSLFCPDTSDFSS 233
            I+P +     + D  + S+P   +H  + S+E  F DV L   +N E S    D+ +   
Sbjct: 734  IYPDEIWAKNRSDHEYCSSPKKDVHYGHLSDETTFGDVCLLDNLNHETSWLFSDSINVKR 793

Query: 232  TLHDFKPKFHAQKGNVMDGNI---WYEQQFQSRSLPMNYKERSRRSQSAPPFYRGKRKYS 62
            T  D   KF     +  D  +    +EQ F++  L   +K RSRRS SAPPFY+GK K+ 
Sbjct: 794  T--DGYSKFRVHPVHNHDKGVESSLHEQGFRNHVLSQAHKVRSRRSSSAPPFYKGKCKFF 851

Query: 61   LLCGCLTAVGATKPSFLDSK 2
             L  CLT     KP F  SK
Sbjct: 852  TL-NCLTKTAGKKPDFEFSK 870


>ref|XP_010935309.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MLH3-like
            [Elaeis guineensis]
          Length = 1252

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
 Frame = -1

Query: 412  IHPIKSCTVTKLDGNHSSNPMIKIHRCYPSNEIAFKDVHLSIKMNDEMSLFCPDTSDFSS 233
            I+P +S   ++ D  + S+P   +   + S+E  F DV L   ++ E      D+++   
Sbjct: 752  IYPDESWAKSRSDHEYCSSPNKDLRYGHLSDETTFGDVCLLDNLHCETGWLFSDSTNVKR 811

Query: 232  TLHDFKPKFHAQKGNVMDGNI---WYEQQFQSRSLPMNYKERSRRSQSAPPFYRGKRKYS 62
            T  D   KF     +  D  +   ++EQ+F +  L   YK RS+RS SAPPFY+GK K+ 
Sbjct: 812  T--DGYSKFRVHPVHNHDKVVESSFHEQEFLNHELSQAYKVRSKRSSSAPPFYKGKCKF- 868

Query: 61   LLCGCLTAVGATKPSFLDSK 2
            L+  CLT     +P F  SK
Sbjct: 869  LILNCLTKTVRKEPDFEFSK 888


>ref|XP_010935306.1| PREDICTED: DNA mismatch repair protein MLH3-like [Elaeis guineensis]
          Length = 1243

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
 Frame = -1

Query: 412  IHPIKSCTVTKLDGNHSSNPMIKIHRCYPSNEIAFKDVHLSIKMNDEMSLFCPDTSDFSS 233
            I+P +    ++ D  + S+P   +   + SNE    DV L   ++ E      D+++   
Sbjct: 744  IYPDEGWAKSRSDHEYCSSPNKDMCYGHLSNETISGDVCLLDNLHHETGWLFSDSTNVER 803

Query: 232  TLHDFKPKFHAQKGN--VMDGNIWYEQQFQSRSLPMNYKERSRRSQSAPPFYRGKRKYSL 59
            T    K + H    +  V++ + ++EQ+F++      +K RS+RS SAPPFY+GK K+ +
Sbjct: 804  TDGYSKFRIHPVHNHDKVVESS-FHEQEFRNHEQSHAHKVRSKRSSSAPPFYKGKCKFFI 862

Query: 58   LCGCLTAVGATKPSFLDSK 2
            L  CLT     +P F  SK
Sbjct: 863  L-NCLTKTVGKEPHFEFSK 880


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