BLASTX nr result

ID: Cheilocostus21_contig00039669 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00039669
         (1185 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PON37546.1| hypothetical protein TorRG33x02_347160, partial [...    55   8e-06

>gb|PON37546.1| hypothetical protein TorRG33x02_347160, partial [Trema orientalis]
          Length = 101

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/63 (38%), Positives = 39/63 (61%)
 Frame = -3

Query: 973 LKQNRSDRIFDSGCSKHTTGEINPFATLSRKKGSMVTFNNNAKGKXXXXXXXXINLHPII 794
           + +N++    DSGCSKH TG+++  ++ ++K G  VTF +NAKGK         +  PII
Sbjct: 1   MTKNQNFWFLDSGCSKHMTGDLSLLSSFTKKNGGYVTFGDNAKGKIMGIGNIGNSSSPII 60

Query: 793 DNI 785
           +N+
Sbjct: 61  ENV 63


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