BLASTX nr result
ID: Cheilocostus21_contig00007100
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00007100
(1140 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009386152.1| PREDICTED: DNA-directed RNA polymerase III s... 411 e-141
ref|XP_009404340.1| PREDICTED: DNA-directed RNA polymerase III s... 384 e-131
ref|XP_008813399.1| PREDICTED: DNA-directed RNA polymerase III s... 363 e-123
ref|XP_010927732.1| PREDICTED: DNA-directed RNA polymerase III s... 354 e-119
ref|XP_019705973.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 327 e-108
ref|XP_020574967.1| DNA-directed RNA polymerase III subunit RPC6... 315 e-103
ref|XP_020691279.1| DNA-directed RNA polymerase III subunit RPC6... 302 6e-99
gb|PKA46474.1| hypothetical protein AXF42_Ash012607 [Apostasia s... 290 3e-94
ref|XP_021609496.1| DNA-directed RNA polymerase III subunit RPC6... 275 5e-88
ref|XP_021672680.1| DNA-directed RNA polymerase III subunit RPC6... 270 3e-86
gb|OVA07786.1| RNA polymerase Rpc34 [Macleaya cordata] 270 5e-86
gb|OVA19488.1| RNA polymerase Rpc34 [Macleaya cordata] 269 1e-85
ref|XP_021681807.1| DNA-directed RNA polymerase III subunit RPC6... 268 1e-85
ref|XP_018829908.1| PREDICTED: DNA-directed RNA polymerase III s... 267 6e-85
ref|XP_018831899.1| PREDICTED: DNA-directed RNA polymerase III s... 266 8e-85
ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s... 265 2e-84
ref|XP_006427248.1| DNA-directed RNA polymerase III subunit RPC6... 264 6e-84
ref|XP_020082464.1| DNA-directed RNA polymerase III subunit RPC6... 264 6e-84
ref|XP_020082463.1| DNA-directed RNA polymerase III subunit RPC6... 264 9e-84
ref|XP_010647482.1| PREDICTED: DNA-directed RNA polymerase III s... 262 4e-83
>ref|XP_009386152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
acuminata subsp. malaccensis]
ref|XP_009386160.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
acuminata subsp. malaccensis]
Length = 237
Score = 411 bits (1056), Expect = e-141
Identities = 202/236 (85%), Positives = 218/236 (92%)
Frame = +1
Query: 301 MSRLPTLPQKRPQPEPQTPSLSLPEPERKVYELIKSRKNMGIWRADMKEETGLQNIVLTK 480
MSR PQKR QP+ Q+ +LPE ER +YELIKSRKNMGIW ADMK+ETGLQNIV+TK
Sbjct: 1 MSRPSMTPQKRAQPDSQSQPPALPENERILYELIKSRKNMGIWTADMKKETGLQNIVVTK 60
Query: 481 ALKSLQNKNLIKDVVNVHNKAKKIFMAVEFEPSKEVSGGSWYSDGNLDTEFINILRKMCL 660
ALKSLQNKNLIKDVVNVHNKA+KIFMAVEFEPSKEVSGGSWYS+G+LDTEFINILRKMCL
Sbjct: 61 ALKSLQNKNLIKDVVNVHNKARKIFMAVEFEPSKEVSGGSWYSEGSLDTEFINILRKMCL 120
Query: 661 RHIEELKVATIEEIWKSIAASRVLKVECTMQQILEIVRALALDKEIEELKSTGVGEFSTV 840
+HIEELKVATIE+IWKSI+AS VLKV CTMQQ+LEIVRALALDKEIEELKSTGVGEFSTV
Sbjct: 121 KHIEELKVATIEDIWKSISASGVLKVACTMQQVLEIVRALALDKEIEELKSTGVGEFSTV 180
Query: 841 QAGRICYRSFRGRQTARVGHLSSIPCGVCPRISECTPDGVISPKTCVYYNKWLKLE 1008
Q G++CYRS RGR+ RVGHLSSIPCGVCPRISECTPDGVISPKTCVYYNKWLKLE
Sbjct: 181 QTGKVCYRSLRGREAPRVGHLSSIPCGVCPRISECTPDGVISPKTCVYYNKWLKLE 236
>ref|XP_009404340.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
acuminata subsp. malaccensis]
ref|XP_018684305.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
acuminata subsp. malaccensis]
Length = 237
Score = 384 bits (985), Expect = e-131
Identities = 187/236 (79%), Positives = 210/236 (88%)
Frame = +1
Query: 301 MSRLPTLPQKRPQPEPQTPSLSLPEPERKVYELIKSRKNMGIWRADMKEETGLQNIVLTK 480
MSR P PQKR QP+ QT +LPE ER VYELIKSRKNMGIW AD+K E G+QNI++TK
Sbjct: 1 MSRPPMTPQKRRQPDSQTQPPALPESERIVYELIKSRKNMGIWIADIKREAGIQNIIVTK 60
Query: 481 ALKSLQNKNLIKDVVNVHNKAKKIFMAVEFEPSKEVSGGSWYSDGNLDTEFINILRKMCL 660
ALKSLQ+KNLIKDVVNVHNK++K FMAVEFEPSKEVSGGSWYSDG+LDTEFINILR MCL
Sbjct: 61 ALKSLQSKNLIKDVVNVHNKSRKTFMAVEFEPSKEVSGGSWYSDGSLDTEFINILRMMCL 120
Query: 661 RHIEELKVATIEEIWKSIAASRVLKVECTMQQILEIVRALALDKEIEELKSTGVGEFSTV 840
+HIE+L++ATIE+I K IAASR++KVECTMQQ+LEIVRALALDKEIEELKSTGV EFS V
Sbjct: 121 KHIEDLRIATIEDIHKCIAASRIMKVECTMQQVLEIVRALALDKEIEELKSTGVAEFSMV 180
Query: 841 QAGRICYRSFRGRQTARVGHLSSIPCGVCPRISECTPDGVISPKTCVYYNKWLKLE 1008
Q+G+ICYR RGRQ VGHLSSIPCG+CPRISECTP+GVISP TCVYY +WLKLE
Sbjct: 181 QSGKICYRRSRGRQGPSVGHLSSIPCGMCPRISECTPEGVISPNTCVYYKQWLKLE 236
>ref|XP_008813399.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Phoenix
dactylifera]
ref|XP_008813400.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Phoenix
dactylifera]
Length = 232
Score = 363 bits (933), Expect = e-123
Identities = 171/230 (74%), Positives = 201/230 (87%)
Frame = +1
Query: 319 LPQKRPQPEPQTPSLSLPEPERKVYELIKSRKNMGIWRADMKEETGLQNIVLTKALKSLQ 498
LPQKRP P+ +T L E ER +YELIKS++N+GIW ADMK ETGLQ V+TK LKSLQ
Sbjct: 2 LPQKRPHPDSKTKLPPLSETERVLYELIKSKQNLGIWTADMKRETGLQTTVVTKTLKSLQ 61
Query: 499 NKNLIKDVVNVHNKAKKIFMAVEFEPSKEVSGGSWYSDGNLDTEFINILRKMCLRHIEEL 678
NKNLIKDVVN+HNKA+KI+MAVEFEPSKE+SGGSWYSDG+LDT+FI ILR+ CL+HIE L
Sbjct: 62 NKNLIKDVVNIHNKARKIYMAVEFEPSKEISGGSWYSDGSLDTDFIRILREQCLKHIERL 121
Query: 679 KVATIEEIWKSIAASRVLKVECTMQQILEIVRALALDKEIEELKSTGVGEFSTVQAGRIC 858
+VAT+E I+KSI SRV KVECTMQQI+EIV A+ LDKE+EELKSTG+G+FS VQ+G+IC
Sbjct: 122 QVATMEAIYKSIQESRVFKVECTMQQIVEIVNAMVLDKEVEELKSTGIGDFSKVQSGKIC 181
Query: 859 YRSFRGRQTARVGHLSSIPCGVCPRISECTPDGVISPKTCVYYNKWLKLE 1008
YRS +GR+ +VG SSIPCGVCPRISECTPDG+ISPKTC+YYNKWLKLE
Sbjct: 182 YRSLKGREGPKVGAFSSIPCGVCPRISECTPDGIISPKTCIYYNKWLKLE 231
>ref|XP_010927732.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis]
ref|XP_010927733.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis]
ref|XP_010927734.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis]
ref|XP_010927735.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis]
Length = 237
Score = 354 bits (908), Expect = e-119
Identities = 167/236 (70%), Positives = 200/236 (84%)
Frame = +1
Query: 301 MSRLPTLPQKRPQPEPQTPSLSLPEPERKVYELIKSRKNMGIWRADMKEETGLQNIVLTK 480
MS LPQKRP P+ + +L E ER +YELI+S++N+GIW ADMK ETGLQ V+TK
Sbjct: 1 MSASSMLPQKRPHPDSKPKLPALSETERILYELIRSKQNIGIWTADMKRETGLQTTVVTK 60
Query: 481 ALKSLQNKNLIKDVVNVHNKAKKIFMAVEFEPSKEVSGGSWYSDGNLDTEFINILRKMCL 660
LKSLQNKNLIKDVVN+HNKA+KI+MA+EFEPSKE+SGGSWYSDG+LD EFI ILR+ CL
Sbjct: 61 TLKSLQNKNLIKDVVNIHNKARKIYMAMEFEPSKEISGGSWYSDGSLDIEFIRILREQCL 120
Query: 661 RHIEELKVATIEEIWKSIAASRVLKVECTMQQILEIVRALALDKEIEELKSTGVGEFSTV 840
+HIE L++AT+E I+KSI SRV KVECTMQQI+EIV A+ LDKEIEELKSTG+G+FS V
Sbjct: 121 KHIERLQIATMEAIYKSIQESRVFKVECTMQQIVEIVNAMVLDKEIEELKSTGIGDFSKV 180
Query: 841 QAGRICYRSFRGRQTARVGHLSSIPCGVCPRISECTPDGVISPKTCVYYNKWLKLE 1008
+G+ICY+S +GR+ ++G LSSIPCGVCPRI ECTPDG+ISPKTCVYYNKWL LE
Sbjct: 181 PSGKICYKSLKGREGPKIGALSSIPCGVCPRIGECTPDGIISPKTCVYYNKWLSLE 236
>ref|XP_019705973.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
subunit rpc6-like [Elaeis guineensis]
Length = 240
Score = 327 bits (837), Expect = e-108
Identities = 157/239 (65%), Positives = 190/239 (79%), Gaps = 3/239 (1%)
Frame = +1
Query: 301 MSRLPTLPQKRPQPEPQTPSLSLPEPERKVYELIKSRKNMGIWRADMKEETGLQNIVLTK 480
MS P LPQK+ + +T L E ER +Y LIKS++N+GIW AD K +TGLQ V+TK
Sbjct: 1 MSASPNLPQKQLLRDSKTKLPPLSETERVLYGLIKSKQNLGIWTADTKRDTGLQTTVVTK 60
Query: 481 ALKSLQNKNLIKDVVNVHN---KAKKIFMAVEFEPSKEVSGGSWYSDGNLDTEFINILRK 651
LKSLQNKNLIKDVVN+HN KA+KI++AVEFEP KE+SGGSWYSDG+LDT+FI ILR+
Sbjct: 61 TLKSLQNKNLIKDVVNIHNIHNKARKIYVAVEFEPXKEISGGSWYSDGSLDTDFIRILRE 120
Query: 652 MCLRHIEELKVATIEEIWKSIAASRVLKVECTMQQILEIVRALALDKEIEELKSTGVGEF 831
CL HIE +VAT+E I+KSI SRV KVECTM I+EIV A+ LDKE+EELKSTG+G+F
Sbjct: 121 QCLNHIERFQVATMEAIYKSIQESRVFKVECTMHHIVEIVNAMVLDKEVEELKSTGIGDF 180
Query: 832 STVQAGRICYRSFRGRQTARVGHLSSIPCGVCPRISECTPDGVISPKTCVYYNKWLKLE 1008
S Q+G+ICYRS R R ++G SSIPCGVCPRI EC P+G+ISPKTC+YYNKWLK+E
Sbjct: 181 SKAQSGKICYRSLRSRGGLKIGAFSSIPCGVCPRIRECAPNGIISPKTCIYYNKWLKME 239
>ref|XP_020574967.1| DNA-directed RNA polymerase III subunit RPC6 [Phalaenopsis equestris]
Length = 282
Score = 315 bits (807), Expect = e-103
Identities = 150/236 (63%), Positives = 187/236 (79%)
Frame = +1
Query: 301 MSRLPTLPQKRPQPEPQTPSLSLPEPERKVYELIKSRKNMGIWRADMKEETGLQNIVLTK 480
M+ LPQKR P LPE E+K+++LI S++++GIW ADMK++TGL N +TK
Sbjct: 53 MNGTAKLPQKRKLPP-------LPENEKKLHDLIWSKQSLGIWTADMKKQTGLANNAVTK 105
Query: 481 ALKSLQNKNLIKDVVNVHNKAKKIFMAVEFEPSKEVSGGSWYSDGNLDTEFINILRKMCL 660
ALKSLQ+KNLIKDVVNVHNKA+K FMAVEFEPSKE+SGG+WYSDG LD EFI ILR+ C
Sbjct: 106 ALKSLQSKNLIKDVVNVHNKARKFFMAVEFEPSKEISGGTWYSDGTLDLEFIRILREQCR 165
Query: 661 RHIEELKVATIEEIWKSIAASRVLKVECTMQQILEIVRALALDKEIEELKSTGVGEFSTV 840
H+E LK+A++E +WK + S + K EC++QQI EI+ A+ LDKEIEEL S+GVGEFS +
Sbjct: 166 MHVERLKIASVENVWKCVRDSGIFKTECSLQQIQEILVAMYLDKEIEELISSGVGEFSNI 225
Query: 841 QAGRICYRSFRGRQTARVGHLSSIPCGVCPRISECTPDGVISPKTCVYYNKWLKLE 1008
QAG+ CYRS RGR + G LSS+PCGVCPRI+EC+PDG+ISPKTCVYY KWL L+
Sbjct: 226 QAGKKCYRSLRGRGGPKAGGLSSVPCGVCPRINECSPDGIISPKTCVYYQKWLGLD 281
>ref|XP_020691279.1| DNA-directed RNA polymerase III subunit RPC6 [Dendrobium catenatum]
ref|XP_020691280.1| DNA-directed RNA polymerase III subunit RPC6 [Dendrobium catenatum]
gb|PKU75411.1| hypothetical protein MA16_Dca020480 [Dendrobium catenatum]
Length = 231
Score = 302 bits (774), Expect = 6e-99
Identities = 144/236 (61%), Positives = 184/236 (77%)
Frame = +1
Query: 301 MSRLPTLPQKRPQPEPQTPSLSLPEPERKVYELIKSRKNMGIWRADMKEETGLQNIVLTK 480
MS LPQKR P +LPE E+K+Y+LI S++ +GIW ADMK+ETGL N +TK
Sbjct: 2 MSGTGKLPQKRKVP-------ALPENEKKLYDLIWSKETLGIWTADMKKETGLPNNAVTK 54
Query: 481 ALKSLQNKNLIKDVVNVHNKAKKIFMAVEFEPSKEVSGGSWYSDGNLDTEFINILRKMCL 660
ALKSLQ+K IKDVVN+HNKAKKI+MAVEFEPSKE+SGG+WYS+G+LD EFI ILRK C
Sbjct: 55 ALKSLQSKGFIKDVVNIHNKAKKIYMAVEFEPSKEISGGTWYSEGSLDLEFITILRKQCR 114
Query: 661 RHIEELKVATIEEIWKSIAASRVLKVECTMQQILEIVRALALDKEIEELKSTGVGEFSTV 840
H+E LKVAT+E +W+ I S+V ++ ++QQI EI+ A+ LDKE+EEL S+GVG+F +
Sbjct: 115 LHVERLKVATLENVWQFIRDSKVFYIDFSLQQIKEIMSAMVLDKELEELISSGVGDFFHI 174
Query: 841 QAGRICYRSFRGRQTARVGHLSSIPCGVCPRISECTPDGVISPKTCVYYNKWLKLE 1008
+AGR CYRS +GR + G S++PCGVCPRI+EC+PDG+ISP TCVYY KWL L+
Sbjct: 175 RAGRECYRSLKGRDGPKEGFFSAVPCGVCPRINECSPDGIISPNTCVYYQKWLGLD 230
>gb|PKA46474.1| hypothetical protein AXF42_Ash012607 [Apostasia shenzhenica]
Length = 230
Score = 290 bits (743), Expect = 3e-94
Identities = 144/230 (62%), Positives = 172/230 (74%)
Frame = +1
Query: 319 LPQKRPQPEPQTPSLSLPEPERKVYELIKSRKNMGIWRADMKEETGLQNIVLTKALKSLQ 498
L QKR P SLPE E+K+Y++I S+ MG+W ADMK+ TGL N TK LKSLQ
Sbjct: 7 LSQKRKLP-------SLPENEKKLYDVIWSKGTMGMWTADMKKATGLPNNTFTKTLKSLQ 59
Query: 499 NKNLIKDVVNVHNKAKKIFMAVEFEPSKEVSGGSWYSDGNLDTEFINILRKMCLRHIEEL 678
K+LIK V N++NK KK FMAVEFEPSKE++GG+WYS+G+LD EFIN+LR CLRHIE
Sbjct: 60 TKDLIKAVANINNKGKKFFMAVEFEPSKEITGGTWYSEGSLDFEFINVLRGQCLRHIERH 119
Query: 679 KVATIEEIWKSIAASRVLKVECTMQQILEIVRALALDKEIEELKSTGVGEFSTVQAGRIC 858
KVAT+E +W+ I S V ECTMQQI EI+ A+ LDKEIEEL S+GVG+ S + AGR C
Sbjct: 120 KVATVEIVWQCIRDSGVFTTECTMQQIKEIMGAMVLDKEIEELNSSGVGDSSHIPAGRKC 179
Query: 859 YRSFRGRQTARVGHLSSIPCGVCPRISECTPDGVISPKTCVYYNKWLKLE 1008
YRS RGR + G +SIPCGVCPRI EC PDGVISP+TCVYY KWL +E
Sbjct: 180 YRSSRGRAGSNDGSFASIPCGVCPRIYECIPDGVISPETCVYYQKWLDIE 229
>ref|XP_021609496.1| DNA-directed RNA polymerase III subunit RPC6 [Manihot esculenta]
gb|OAY52825.1| hypothetical protein MANES_04G114300 [Manihot esculenta]
gb|OAY52826.1| hypothetical protein MANES_04G114300 [Manihot esculenta]
Length = 236
Score = 275 bits (702), Expect = 5e-88
Identities = 137/236 (58%), Positives = 178/236 (75%), Gaps = 3/236 (1%)
Frame = +1
Query: 301 MSRLPTLPQKRPQPEPQTPSLSLPEPERKVYELIKSRKNMGIWRADMKEETGLQNIVLTK 480
MSRL L QKR Q + ++P+ SL E ER +Y +I+++++MGIW DMK ET L + V+ K
Sbjct: 1 MSRL--LGQKRKQTDSKSPAESLTEQERILYNVIRNKQDMGIWTRDMKRETSLPDNVVNK 58
Query: 481 ALKSLQNKNLIKDVVNVHNKAKKIFMAVEFEPSKEVSGGSWYSDGNLDTEFINILRKMCL 660
+LK LQ KNLIK+VVN+ NK +K +MA EFEPSKE++GG+WY +GNLDTEFI IL++ C
Sbjct: 59 SLKVLQAKNLIKEVVNIQNKGRKHYMATEFEPSKEITGGTWYVEGNLDTEFIQILKEQCT 118
Query: 661 RHIEELKVATIEEIWKSIAASRVLKVECTMQQILEIVRALALDKEIEELKSTGVGEFSTV 840
+ I +LKVAT+E I SI S VL VE T QQI EIV+AL LD EI ELKS G+GEF+++
Sbjct: 119 KQIYKLKVATLEGITDSIKRSGVLNVELTKQQIDEIVKALVLDNEIIELKSNGMGEFASI 178
Query: 841 QAGRICYRSF---RGRQTARVGHLSSIPCGVCPRISECTPDGVISPKTCVYYNKWL 999
G+ICY+ G ++G ++SIPCGVCPRI +CTPDG+ISP+TCVYYNKWL
Sbjct: 179 PVGKICYKCISKGSGGGEPKIGAMASIPCGVCPRIHQCTPDGIISPQTCVYYNKWL 234
>ref|XP_021672680.1| DNA-directed RNA polymerase III subunit RPC6-like [Hevea
brasiliensis]
ref|XP_021672688.1| DNA-directed RNA polymerase III subunit RPC6-like [Hevea
brasiliensis]
Length = 236
Score = 270 bits (690), Expect = 3e-86
Identities = 134/236 (56%), Positives = 176/236 (74%), Gaps = 3/236 (1%)
Frame = +1
Query: 301 MSRLPTLPQKRPQPEPQTPSLSLPEPERKVYELIKSRKNMGIWRADMKEETGLQNIVLTK 480
MSRL QKR Q + +P+ SL E ER +Y +I+S+++MGIW DMK ET L + V+ K
Sbjct: 1 MSRLHG--QKRKQTDSNSPAQSLTEHERVLYNVIRSKQDMGIWTRDMKRETNLPDNVVNK 58
Query: 481 ALKSLQNKNLIKDVVNVHNKAKKIFMAVEFEPSKEVSGGSWYSDGNLDTEFINILRKMCL 660
+LK LQ KNLIK+VVN+ NK +K +MA+EFEPSKE++GG+WY DGNLDTEFI IL++ C
Sbjct: 59 SLKVLQAKNLIKEVVNIQNKGRKHYMAMEFEPSKEITGGAWYVDGNLDTEFIQILKEQCT 118
Query: 661 RHIEELKVATIEEIWKSIAASRVLKVECTMQQILEIVRALALDKEIEELKSTGVGEFSTV 840
+ I +LKVAT+E + SI S VL VE T QQI EIV+AL LD EI E+KS G+GEF+++
Sbjct: 119 KQIYKLKVATLEGVTDSIRRSGVLNVELTKQQIEEIVKALVLDDEIIEVKSNGMGEFASI 178
Query: 841 QAGRICYRSFRGRQTA---RVGHLSSIPCGVCPRISECTPDGVISPKTCVYYNKWL 999
G+ICY+ R + G ++SIPCGVCPR+ +CTPDG+ISP+TCVYY+KWL
Sbjct: 179 PVGKICYKCIRKGSIGGEPKTGAMASIPCGVCPRMRQCTPDGIISPQTCVYYSKWL 234
>gb|OVA07786.1| RNA polymerase Rpc34 [Macleaya cordata]
Length = 236
Score = 270 bits (689), Expect = 5e-86
Identities = 131/236 (55%), Positives = 174/236 (73%), Gaps = 3/236 (1%)
Frame = +1
Query: 301 MSRLP---TLPQKRPQPEPQTPSLSLPEPERKVYELIKSRKNMGIWRADMKEETGLQNIV 471
M R+P L +KR + T LS +PER++Y+LI+S+++MGIW+ DMK ET L
Sbjct: 1 MGRVPDNSALKRKRVDSKATTQKLS--DPERRLYDLIRSKEDMGIWKGDMKWETKLLEPF 58
Query: 472 LTKALKSLQNKNLIKDVVNVHNKAKKIFMAVEFEPSKEVSGGSWYSDGNLDTEFINILRK 651
+TK+LKSL++K LIK+VVN+H K KK FMAVEFEPS E++GG+WY +G LDTEFI IL++
Sbjct: 59 VTKSLKSLKDKRLIKEVVNIHKKGKKYFMAVEFEPSMELTGGAWYVEGKLDTEFIQILKE 118
Query: 652 MCLRHIEELKVATIEEIWKSIAASRVLKVECTMQQILEIVRALALDKEIEELKSTGVGEF 831
C++HI +LKVAT+E I +SI S + KVECT++QI EIV+ L LD E+ +L STG G+F
Sbjct: 119 QCMKHIYKLKVATVEGITESIRKSGLFKVECTIKQIAEIVQTLVLDNEVVKLSSTGTGDF 178
Query: 832 STVQAGRICYRSFRGRQTARVGHLSSIPCGVCPRISECTPDGVISPKTCVYYNKWL 999
+ + G CYR R G ++SIPCGVCPRI++CTPDG+ISP TCVYY KWL
Sbjct: 179 THIPVGTECYRCSNKGGVPRTGAMASIPCGVCPRINDCTPDGIISPTTCVYYKKWL 234
>gb|OVA19488.1| RNA polymerase Rpc34 [Macleaya cordata]
Length = 236
Score = 269 bits (687), Expect = 1e-85
Identities = 130/236 (55%), Positives = 174/236 (73%), Gaps = 3/236 (1%)
Frame = +1
Query: 301 MSRLP---TLPQKRPQPEPQTPSLSLPEPERKVYELIKSRKNMGIWRADMKEETGLQNIV 471
M R+P L +KR + T LS +PER++Y+LI+S+++MGIW+ DMK ET L
Sbjct: 1 MGRVPDNSALKRKRVDSKATTQKLS--DPERRLYDLIRSKEDMGIWKGDMKWETKLLEPF 58
Query: 472 LTKALKSLQNKNLIKDVVNVHNKAKKIFMAVEFEPSKEVSGGSWYSDGNLDTEFINILRK 651
+TK+LKSL++K LIK+VVN+H K KK FMAVEFEPS E++GG+WY +G LDTEFI IL++
Sbjct: 59 VTKSLKSLKDKRLIKEVVNIHKKGKKYFMAVEFEPSMELTGGAWYVEGKLDTEFIQILKE 118
Query: 652 MCLRHIEELKVATIEEIWKSIAASRVLKVECTMQQILEIVRALALDKEIEELKSTGVGEF 831
C++HI +LKVAT+E I +SI S + KVECT++QI EIV+ L LD E+ ++ STG G+F
Sbjct: 119 QCMKHIYKLKVATVEGITESIRKSGLFKVECTIKQIAEIVQTLVLDNEVVKISSTGTGDF 178
Query: 832 STVQAGRICYRSFRGRQTARVGHLSSIPCGVCPRISECTPDGVISPKTCVYYNKWL 999
+ + G CYR R G ++SIPCGVCPRI++CTPDG+ISP TCVYY KWL
Sbjct: 179 THIPVGTECYRCSNKGGVPRTGAMASIPCGVCPRINDCTPDGIISPTTCVYYKKWL 234
>ref|XP_021681807.1| DNA-directed RNA polymerase III subunit RPC6-like [Hevea
brasiliensis]
Length = 236
Score = 268 bits (686), Expect = 1e-85
Identities = 134/236 (56%), Positives = 174/236 (73%), Gaps = 3/236 (1%)
Frame = +1
Query: 301 MSRLPTLPQKRPQPEPQTPSLSLPEPERKVYELIKSRKNMGIWRADMKEETGLQNIVLTK 480
MSRL QKR Q + +P+ SL E ER +Y +I+S+++MGIW DMK ET L + V+ K
Sbjct: 1 MSRLQG--QKRKQTDSNSPAQSLTEQERILYNVIRSKQDMGIWTRDMKRETNLPDNVVNK 58
Query: 481 ALKSLQNKNLIKDVVNVHNKAKKIFMAVEFEPSKEVSGGSWYSDGNLDTEFINILRKMCL 660
+LK LQ KNLIK+VVN+ NK +K +MA EFEPSKE++GG+WY +GNLDTEFI IL++ C
Sbjct: 59 SLKVLQAKNLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIQILKEQCT 118
Query: 661 RHIEELKVATIEEIWKSIAASRVLKVECTMQQILEIVRALALDKEIEELKSTGVGEFSTV 840
+ I +LKVAT+E + SI S VL VE T QQI EI++AL LD EI ELKS G+GEF+++
Sbjct: 119 KQIYKLKVATLEGVTDSIKRSGVLNVELTKQQIDEILKALVLDNEIIELKSNGMGEFASI 178
Query: 841 QAGRICYRSFRGRQTA---RVGHLSSIPCGVCPRISECTPDGVISPKTCVYYNKWL 999
G+ICY+ R G ++SIPCGVCPRI +CTPDG+ISP+TCVYY+KWL
Sbjct: 179 PVGKICYKCISKGNIGGEPRTGAMASIPCGVCPRIRQCTPDGIISPQTCVYYSKWL 234
>ref|XP_018829908.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Juglans regia]
ref|XP_018829909.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Juglans regia]
ref|XP_018829910.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Juglans regia]
Length = 239
Score = 267 bits (682), Expect = 6e-85
Identities = 131/238 (55%), Positives = 176/238 (73%), Gaps = 5/238 (2%)
Frame = +1
Query: 301 MSRL--PTLPQKRPQPEPQTPSLSLPEPERKVYELIKSRKNMGIWRADMKEETGLQNIVL 474
MSRL P+L KR +P+ +PS+SL E ER +Y+LI+S+++M IW DMK ET L + V+
Sbjct: 1 MSRLQGPSL-LKRKRPDSNSPSVSLTEHERLLYDLIQSKQDMAIWTRDMKRETNLPDNVV 59
Query: 475 TKALKSLQNKNLIKDVVNVHNKAKKIFMAVEFEPSKEVSGGSWYSDGNLDTEFINILRKM 654
TK+LKSLQ K LIK+VVN+ NK +K ++A EFEPS E++GG+WY++GNLDTEFIN L+K
Sbjct: 60 TKSLKSLQTKKLIKEVVNIQNKGRKHYIATEFEPSTEITGGTWYAEGNLDTEFINFLKKH 119
Query: 655 CLRHIEELKVATIEEIWKSIAASRVLKVECTMQQILEIVRALALDKEIEELKSTGVGEFS 834
C++ I E KVAT+E + +I SR +E T QQ+ EIV L LD EI E+KS G+GEF
Sbjct: 120 CVKIIYEQKVATLEGVLDTIRRSRAFNIEFTTQQVEEIVNVLVLDNEIMEVKSNGIGEFG 179
Query: 835 TVQAGRICYRSFR---GRQTARVGHLSSIPCGVCPRISECTPDGVISPKTCVYYNKWL 999
++ GR+CY + ++G ++SIPCGVCPRIS CTPDG+ISPKTCVY++KWL
Sbjct: 180 SIPVGRVCYTCTNKGGNKGEPKIGAMASIPCGVCPRISLCTPDGIISPKTCVYFSKWL 237
>ref|XP_018831899.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Juglans regia]
ref|XP_018831900.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Juglans regia]
ref|XP_018831901.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Juglans regia]
Length = 238
Score = 266 bits (681), Expect = 8e-85
Identities = 132/236 (55%), Positives = 172/236 (72%), Gaps = 3/236 (1%)
Frame = +1
Query: 301 MSRLP-TLPQKRPQPEPQTPSLSLPEPERKVYELIKSRKNMGIWRADMKEETGLQNIVLT 477
MSRL P KR +P+ TPS SL E ER +Y+LI+S+++M IW DMK ET L + V+T
Sbjct: 1 MSRLQGPSPLKRKRPDSNTPSGSLTEHERLLYDLIRSKQDMAIWTRDMKRETNLPDNVVT 60
Query: 478 KALKSLQNKNLIKDVVNVHNKAKKIFMAVEFEPSKEVSGGSWYSDGNLDTEFINILRKMC 657
K+LKSLQ K LIK+VVN+ NK +K ++A EFEPS E++GG+WY++GNLDTEFIN L+K C
Sbjct: 61 KSLKSLQTKKLIKEVVNIQNKGRKHYIATEFEPSMEITGGTWYAEGNLDTEFINFLKKHC 120
Query: 658 LRHIEELKVATIEEIWKSIAASRVLKVECTMQQILEIVRALALDKEIEELKSTGVGEFST 837
++ I E KV T+E I +I SR VE T QQ+ EIV +L LD EI E+KS G+GEF +
Sbjct: 121 VKIIYEQKVTTLEGILDTIRRSRAFNVEFTSQQVEEIVNSLVLDNEIMEVKSNGIGEFDS 180
Query: 838 VQAGRICY--RSFRGRQTARVGHLSSIPCGVCPRISECTPDGVISPKTCVYYNKWL 999
+ GR+CY S ++G ++SIPCGVCP+IS CTPDG+ISPKTCVY+ KWL
Sbjct: 181 IPVGRVCYTCASKGNNGEPKIGAMASIPCGVCPQISLCTPDGIISPKTCVYFTKWL 236
>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Citrus sinensis]
Length = 233
Score = 265 bits (678), Expect = 2e-84
Identities = 130/229 (56%), Positives = 171/229 (74%), Gaps = 5/229 (2%)
Frame = +1
Query: 328 KRPQPEPQTPSLSLPEPERKVYELIKSRKNMGIWRADMKEE--TGLQNIVLTKALKSLQN 501
KR +PE PS SL + ER +Y++I+S+++MGIW DMK E L + ++TK++KSLQN
Sbjct: 3 KRKRPESNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 502 KNLIKDVVNVHNKAKKIFMAVEFEPSKEVSGGSWYSDGNLDTEFINILRKMCLRHIEELK 681
K+LIK+VVN+H+K KK MAVEFEPSKE+SGG+WYS+G+LDTEFI +++ CL+ I +LK
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 682 VATIEEIWKSIAASRVLKVECTMQQILEIVRALALDKEIEELKSTGVGEFSTVQAGRICY 861
VAT+E I SI S KV+ T QQI EIVRAL LD +I E+KS G GEF+ + G++CY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182
Query: 862 RSFR---GRQTARVGHLSSIPCGVCPRISECTPDGVISPKTCVYYNKWL 999
++ G + G L+SIPCGVCP+I+ CTPDGVISPKTCVYY WL
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQINICTPDGVISPKTCVYYTTWL 231
>ref|XP_006427248.1| DNA-directed RNA polymerase III subunit RPC6 [Citrus clementina]
ref|XP_024036378.1| DNA-directed RNA polymerase III subunit RPC6 [Citrus clementina]
gb|ESR40488.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
gb|KDO45213.1| hypothetical protein CISIN_1g026766mg [Citrus sinensis]
gb|KDO45214.1| hypothetical protein CISIN_1g026766mg [Citrus sinensis]
dbj|GAY63105.1| hypothetical protein CUMW_222970 [Citrus unshiu]
Length = 233
Score = 264 bits (675), Expect = 6e-84
Identities = 129/229 (56%), Positives = 171/229 (74%), Gaps = 5/229 (2%)
Frame = +1
Query: 328 KRPQPEPQTPSLSLPEPERKVYELIKSRKNMGIWRADMKEE--TGLQNIVLTKALKSLQN 501
KR +P+ PS SL + ER +Y++I+S+++MGIW DMK E L + ++TK++KSLQN
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 502 KNLIKDVVNVHNKAKKIFMAVEFEPSKEVSGGSWYSDGNLDTEFINILRKMCLRHIEELK 681
K+LIK+VVN+H+K KK MAVEFEPSKE+SGG+WYS+G+LDTEFI +++ CL+ I +LK
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 682 VATIEEIWKSIAASRVLKVECTMQQILEIVRALALDKEIEELKSTGVGEFSTVQAGRICY 861
VAT+E I SI S KV+ T QQI EIVRAL LD +I E+KS G GEF+ + G++CY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182
Query: 862 RSFR---GRQTARVGHLSSIPCGVCPRISECTPDGVISPKTCVYYNKWL 999
++ G + G L+SIPCGVCP+I+ C PDGVISPKTCVYY KWL
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQINICKPDGVISPKTCVYYTKWL 231
>ref|XP_020082464.1| DNA-directed RNA polymerase III subunit RPC6 isoform X2 [Ananas
comosus]
ref|XP_020082466.1| DNA-directed RNA polymerase III subunit RPC6 isoform X2 [Ananas
comosus]
ref|XP_020082467.1| DNA-directed RNA polymerase III subunit RPC6 isoform X2 [Ananas
comosus]
ref|XP_020082468.1| DNA-directed RNA polymerase III subunit RPC6 isoform X2 [Ananas
comosus]
ref|XP_020082469.1| DNA-directed RNA polymerase III subunit RPC6 isoform X2 [Ananas
comosus]
ref|XP_020082470.1| DNA-directed RNA polymerase III subunit RPC6 isoform X2 [Ananas
comosus]
Length = 236
Score = 264 bits (675), Expect = 6e-84
Identities = 129/235 (54%), Positives = 173/235 (73%), Gaps = 5/235 (2%)
Frame = +1
Query: 319 LPQKRPQPEPQT-----PSLSLPEPERKVYELIKSRKNMGIWRADMKEETGLQNIVLTKA 483
+PQKRP+ ++ P L + ER + E I+S++NMGIW D+K+ T L V KA
Sbjct: 2 VPQKRPRLGSKSGAALVPDEGLSDAERMILEAIRSKENMGIWTFDLKKLTNLPRGVFDKA 61
Query: 484 LKSLQNKNLIKDVVNVHNKAKKIFMAVEFEPSKEVSGGSWYSDGNLDTEFINILRKMCLR 663
L+ LQ K LIK VV++HNK++K+++A EFEP+KE+SGG+WYS G+L+ EFI+ +R CL
Sbjct: 62 LRLLQQKGLIKCVVSIHNKSRKMYVAREFEPAKEISGGTWYSQGSLNQEFISDVRSKCLA 121
Query: 664 HIEELKVATIEEIWKSIAASRVLKVECTMQQILEIVRALALDKEIEELKSTGVGEFSTVQ 843
+ L++ATIE++WK I SR K + T+QQI EIV+A+ LDKE+EE+KSTG G+FS V
Sbjct: 122 QVTRLRIATIEDVWKGIQMSRDSKADFTLQQIKEIVQAMVLDKELEEVKSTGDGDFSAVP 181
Query: 844 AGRICYRSFRGRQTARVGHLSSIPCGVCPRISECTPDGVISPKTCVYYNKWLKLE 1008
AGR CYR F R+ G LS+IPCGVCPRISECTPDGVISP TC+Y+ KWL+L+
Sbjct: 182 AGRPCYRRFE-RRAPIAGALSAIPCGVCPRISECTPDGVISPNTCIYFTKWLELD 235
>ref|XP_020082463.1| DNA-directed RNA polymerase III subunit RPC6 isoform X1 [Ananas
comosus]
Length = 247
Score = 264 bits (675), Expect = 9e-84
Identities = 129/235 (54%), Positives = 173/235 (73%), Gaps = 5/235 (2%)
Frame = +1
Query: 319 LPQKRPQPEPQT-----PSLSLPEPERKVYELIKSRKNMGIWRADMKEETGLQNIVLTKA 483
+PQKRP+ ++ P L + ER + E I+S++NMGIW D+K+ T L V KA
Sbjct: 13 VPQKRPRLGSKSGAALVPDEGLSDAERMILEAIRSKENMGIWTFDLKKLTNLPRGVFDKA 72
Query: 484 LKSLQNKNLIKDVVNVHNKAKKIFMAVEFEPSKEVSGGSWYSDGNLDTEFINILRKMCLR 663
L+ LQ K LIK VV++HNK++K+++A EFEP+KE+SGG+WYS G+L+ EFI+ +R CL
Sbjct: 73 LRLLQQKGLIKCVVSIHNKSRKMYVAREFEPAKEISGGTWYSQGSLNQEFISDVRSKCLA 132
Query: 664 HIEELKVATIEEIWKSIAASRVLKVECTMQQILEIVRALALDKEIEELKSTGVGEFSTVQ 843
+ L++ATIE++WK I SR K + T+QQI EIV+A+ LDKE+EE+KSTG G+FS V
Sbjct: 133 QVTRLRIATIEDVWKGIQMSRDSKADFTLQQIKEIVQAMVLDKELEEVKSTGDGDFSAVP 192
Query: 844 AGRICYRSFRGRQTARVGHLSSIPCGVCPRISECTPDGVISPKTCVYYNKWLKLE 1008
AGR CYR F R+ G LS+IPCGVCPRISECTPDGVISP TC+Y+ KWL+L+
Sbjct: 193 AGRPCYRRFE-RRAPIAGALSAIPCGVCPRISECTPDGVISPNTCIYFTKWLELD 246
>ref|XP_010647482.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Vitis
vinifera]
Length = 239
Score = 262 bits (670), Expect = 4e-83
Identities = 129/237 (54%), Positives = 173/237 (72%), Gaps = 4/237 (1%)
Frame = +1
Query: 301 MSRLPTLPQKRPQPEPQTPSLSLPEPERKVYELIKSRKNMGIWRADMKEETGLQNIVLTK 480
MSR KR +P+ T S L + ER +Y+LI+S+++MGIW DMK ET L + V+TK
Sbjct: 1 MSRSQGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTK 60
Query: 481 ALKSLQNKNLIKDVVNVHNKAKKIFMAVEFEPSKEVSGGSWYSDGNLDTEFINILRKMCL 660
+LK+LQ K LIK+VVN+ +K +K +MAVEFEPSKE++GG+WY +GNLDTE+I IL+K C+
Sbjct: 61 SLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTCV 120
Query: 661 RHIEELKVATIEEIWKSIAASRVLKVECTMQQILEIVRALALDKEIEELKSTGVGEFSTV 840
R + +LKVAT E I +SI + + EC+ QQI EI+RAL LD EI E++S+G GEFS++
Sbjct: 121 RVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSI 180
Query: 841 QAGRICYRSFR----GRQTARVGHLSSIPCGVCPRISECTPDGVISPKTCVYYNKWL 999
G +CYR G +G ++SIPCGVCPRI++CTPDG+ISPKTC YY KWL
Sbjct: 181 PIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWL 237