BLASTX nr result

ID: Cephaelis21_contig00054933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00054933
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511392.1| pentatricopeptide repeat-containing protein,...    72   4e-11
ref|XP_002264386.1| PREDICTED: putative pentatricopeptide repeat...    71   8e-11
emb|CAN64813.1| hypothetical protein VITISV_024998 [Vitis vinifera]    71   8e-11
ref|NP_171850.1| pentatricopeptide repeat-containing protein [Ar...    65   4e-09
gb|ADN33897.1| pentatricopeptide (PPR) repeat-containing protein...    65   6e-09

>ref|XP_002511392.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550507|gb|EEF51994.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 441

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/52 (65%), Positives = 40/52 (76%)
 Frame = +3

Query: 81  LKACSSLRCPSLGMSIHALTYKCSFVSNPFVASALVDMYGKCISSSSARQLF 236
           LK+CS++ CP LG S+HA   K  F+SNPFVASALVDMYGKC    SAR+LF
Sbjct: 70  LKSCSAVLCPQLGTSVHAHIVKMGFLSNPFVASALVDMYGKCACIFSARKLF 121


>ref|XP_002264386.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g03510 [Vitis vinifera] gi|298205226|emb|CBI17285.3|
           unnamed protein product [Vitis vinifera]
          Length = 430

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/53 (66%), Positives = 41/53 (77%)
 Frame = +3

Query: 78  ALKACSSLRCPSLGMSIHALTYKCSFVSNPFVASALVDMYGKCISSSSARQLF 236
           ALK+C++   P+LG +IHA   K S VSNPFVA ALVDMYGKC+S SSAR LF
Sbjct: 53  ALKSCAAAHRPNLGAAIHAHVTKFSLVSNPFVACALVDMYGKCVSVSSARHLF 105


>emb|CAN64813.1| hypothetical protein VITISV_024998 [Vitis vinifera]
          Length = 513

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/53 (66%), Positives = 41/53 (77%)
 Frame = +3

Query: 78  ALKACSSLRCPSLGMSIHALTYKCSFVSNPFVASALVDMYGKCISSSSARQLF 236
           ALK+C++   P+LG +IHA   K S VSNPFVA ALVDMYGKC+S SSAR LF
Sbjct: 53  ALKSCAAAHRPNLGAAIHAHVTKFSLVSNPFVACALVDMYGKCVSVSSARHLF 105


>ref|NP_171850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180302|sp|Q9LR72.1|PPR7_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At1g03510 gi|9280666|gb|AAF86535.1|AC002560_28
           F21B7.13 [Arabidopsis thaliana]
           gi|332189459|gb|AEE27580.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 429

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/53 (58%), Positives = 41/53 (77%)
 Frame = +3

Query: 78  ALKACSSLRCPSLGMSIHALTYKCSFVSNPFVASALVDMYGKCISSSSARQLF 236
           ALK+C++   P LG S+HA + K +F+SNPFV  AL+DMYGKC+S S AR+LF
Sbjct: 54  ALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLF 106


>gb|ADN33897.1| pentatricopeptide (PPR) repeat-containing protein [Cucumis melo
           subsp. melo]
          Length = 391

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/52 (61%), Positives = 42/52 (80%)
 Frame = +3

Query: 81  LKACSSLRCPSLGMSIHALTYKCSFVSNPFVASALVDMYGKCISSSSARQLF 236
           LK+C++LR P LG++IHA + K S +S+PFVA ALVDMYGK +S S AR+LF
Sbjct: 18  LKSCTALRRPHLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVSLARKLF 69


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