BLASTX nr result
ID: Cephaelis21_contig00054900
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00054900
(356 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containi... 121 5e-26
ref|XP_003593286.1| Pentatricopeptide repeat-containing protein ... 119 3e-25
gb|ABN05862.1| Tetratricopeptide-like helical [Medicago truncatula] 119 3e-25
ref|XP_002521663.1| pentatricopeptide repeat-containing protein,... 117 1e-24
sp|O65543.2|PP343_ARATH RecName: Full=Pentatricopeptide repeat-c... 112 3e-23
>ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
mitochondrial-like [Glycine max]
Length = 601
Score = 121 bits (304), Expect = 5e-26
Identities = 62/117 (52%), Positives = 84/117 (71%)
Frame = +1
Query: 4 KDVVTWSCIIEGYSRNVDTAKEAIKLFCEMQSEGIPPNSVTLLSVISACTNLLLIGYARG 183
+DVV WS II +SR D+ K A+KLF +M++E I PN VTLL+VISACTNL + + G
Sbjct: 319 RDVVLWSSIIGSFSRRGDSFK-ALKLFNKMRTEEIEPNYVTLLAVISACTNLSSLKHGCG 377
Query: 184 VHGYVLKSCLITELNIQNSLISMYAKCGFLQDSLKIFKEMSQRDSVSWTSIIGAYGL 354
+HGY+ K +++ N+LI+MYAKCG L S K+F EM RD+V+W+S+I AYGL
Sbjct: 378 LHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFLEMPNRDNVTWSSLISAYGL 434
Score = 72.4 bits (176), Expect = 4e-11
Identities = 40/116 (34%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Frame = +1
Query: 4 KDVVTWSCIIEGYSRNVDTAKEAIKLFCEMQSEGIPPNSVTLLSVISACTNLLLIGYARG 183
K+VV+W+ +I G + D EA F MQ+EG+ PN VT ++++SAC + + +
Sbjct: 217 KNVVSWTTMISGCIAHQDY-DEAFACFRAMQAEGVCPNRVTSIALLSACAEPGFVKHGKE 275
Query: 184 VHGYVLKSCLITELNIQNSLISMYAKCGF-LQDSLKIFKEMSQRDSVSWTSIIGAY 348
+HGY + + + ++L++MY +CG + + IF+ S RD V W+SIIG++
Sbjct: 276 IHGYAFRHGFESCPSFSSALVNMYCQCGEPMHLAELIFEGSSFRDVVLWSSIIGSF 331
Score = 55.8 bits (133), Expect = 3e-06
Identities = 32/113 (28%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Frame = +1
Query: 4 KDVVTWSCIIEGYSRNVDTAKEAIKLFCEMQSEGIPPNSVTLLSVISACTNLLLIGYARG 183
+D +TW+ +I GY N +EA++ ++ G+ P L SV+S C + R
Sbjct: 115 RDPITWNSLINGYLHN-GYLEEALEALNDVYLLGLVPKPELLASVVSMCGRRMGSKIGRQ 173
Query: 184 VHGYVLKSCLITE-LNIQNSLISMYAKCGFLQDSLKIFKEMSQRDSVSWTSII 339
+H V+ + I + + + +L+ Y +CG +L++F M ++ VSWT++I
Sbjct: 174 IHALVVVNERIGQSMFLSTALVDFYFRCGDSLMALRVFDGMEVKNVVSWTTMI 226
>ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482334|gb|AES63537.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 622
Score = 119 bits (297), Expect = 3e-25
Identities = 63/117 (53%), Positives = 82/117 (70%)
Frame = +1
Query: 4 KDVVTWSCIIEGYSRNVDTAKEAIKLFCEMQSEGIPPNSVTLLSVISACTNLLLIGYARG 183
+DVV WS II Y+R ++ K A+KLF +M++E PN VTLL+VISACTNL +
Sbjct: 338 RDVVLWSSIIGSYARRGESDK-ALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGV 396
Query: 184 VHGYVLKSCLITELNIQNSLISMYAKCGFLQDSLKIFKEMSQRDSVSWTSIIGAYGL 354
+HGY+LK + + + N+LI+MYAKCG L DS KIF EM RDSV+W S+I AYGL
Sbjct: 397 IHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMISAYGL 453
Score = 78.2 bits (191), Expect = 7e-13
Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Frame = +1
Query: 4 KDVVTWSCIIEGYSRNVDTAKEAIKLFCEMQSEGIPPNSVTLLSVISACTNLLLIGYARG 183
K+ V+W+ +I G + N D A+ + EMQ EG+ PN VTL+++++AC + Y +
Sbjct: 236 KNEVSWTAVISGCANNQDY-DVALACYREMQVEGVSPNRVTLIALLAACARPGFVKYGKE 294
Query: 184 VHGYVLKSCLITELNIQNSLISMYAKCG-FLQDSLKIFKEMSQRDSVSWTSIIGAY 348
+HGY + + + +LI +Y +CG L + +IF+ S RD V W+SIIG+Y
Sbjct: 295 IHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSY 350
>gb|ABN05862.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 460
Score = 119 bits (297), Expect = 3e-25
Identities = 63/117 (53%), Positives = 82/117 (70%)
Frame = +1
Query: 4 KDVVTWSCIIEGYSRNVDTAKEAIKLFCEMQSEGIPPNSVTLLSVISACTNLLLIGYARG 183
+DVV WS II Y+R ++ K A+KLF +M++E PN VTLL+VISACTNL +
Sbjct: 338 RDVVLWSSIIGSYARRGESDK-ALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGV 396
Query: 184 VHGYVLKSCLITELNIQNSLISMYAKCGFLQDSLKIFKEMSQRDSVSWTSIIGAYGL 354
+HGY+LK + + + N+LI+MYAKCG L DS KIF EM RDSV+W S+I AYGL
Sbjct: 397 IHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMISAYGL 453
Score = 78.2 bits (191), Expect = 7e-13
Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Frame = +1
Query: 4 KDVVTWSCIIEGYSRNVDTAKEAIKLFCEMQSEGIPPNSVTLLSVISACTNLLLIGYARG 183
K+ V+W+ +I G + N D A+ + EMQ EG+ PN VTL+++++AC + Y +
Sbjct: 236 KNEVSWTAVISGCANNQDY-DVALACYREMQVEGVSPNRVTLIALLAACARPGFVKYGKE 294
Query: 184 VHGYVLKSCLITELNIQNSLISMYAKCG-FLQDSLKIFKEMSQRDSVSWTSIIGAY 348
+HGY + + + +LI +Y +CG L + +IF+ S RD V W+SIIG+Y
Sbjct: 295 IHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSY 350
>ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539054|gb|EEF40650.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 578
Score = 117 bits (293), Expect = 1e-24
Identities = 62/117 (52%), Positives = 83/117 (70%)
Frame = +1
Query: 4 KDVVTWSCIIEGYSRNVDTAKEAIKLFCEMQSEGIPPNSVTLLSVISACTNLLLIGYARG 183
KDVV WS II Y R+ D+ EA+KLF M+++G PNSVTLL+VI+ACT L + G
Sbjct: 294 KDVVMWSSIIGSYCRSADSI-EALKLFRWMRADGTEPNSVTLLAVITACTTLTSLKNGYG 352
Query: 184 VHGYVLKSCLITELNIQNSLISMYAKCGFLQDSLKIFKEMSQRDSVSWTSIIGAYGL 354
HGY++K L + I N+LI+MY+KCG + S +IFKEM +DSVSW+++I AYGL
Sbjct: 353 THGYIVKCGLNFDTYIGNALINMYSKCGCVVASHQIFKEMHIKDSVSWSTLITAYGL 409
Score = 65.5 bits (158), Expect = 4e-09
Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
Frame = +1
Query: 4 KDVVTWSCIIEGYSRNVDTAKEAIKLFCEMQSEGIPPNSVTLLSVISACTNLLLIGYARG 183
K+VV+W+ ++ G S N+D A+ F MQ G+ PN VTL++++ A L +
Sbjct: 192 KNVVSWTALVSGCSANLDY-NMALDCFRAMQINGVRPNRVTLIAILPAFAELGCAKTGKE 250
Query: 184 VHGYVLKSCLITELNIQNSLISMYAKC-GFLQDSLKIFKEMSQRDSVSWTSIIGAY 348
+HGY + + + +SLI +Y + LQ + F+ + +D V W+SIIG+Y
Sbjct: 251 IHGYAFRHGFDLDHHFLSSLIHIYCRSREGLQLAKLTFERSNVKDVVMWSSIIGSY 306
Score = 63.9 bits (154), Expect = 1e-08
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Frame = +1
Query: 4 KDVVTWSCIIEGYSRNVDTAKEAIKLFCEMQSEGIPPNSVTLLSVISACTNLLLIGYARG 183
KD ++W+CII GY +N + +F EM GI P + SV+S C L + R
Sbjct: 90 KDPISWNCIINGYFQN-GYFTQGFIMFKEMYECGIVPKPELVASVVSVCVRLGDMKLGRA 148
Query: 184 VHGYVL-KSCLITELNIQNSLISMYAKCGFLQDSLKIFKEMSQRDSVSWTSII 339
+H VL + E+ + SL+ Y K G +L++F ++ ++ VSWT+++
Sbjct: 149 IHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLMALRVFDQIEVKNVVSWTALV 201
Score = 60.8 bits (146), Expect = 1e-07
Identities = 37/117 (31%), Positives = 67/117 (57%), Gaps = 3/117 (2%)
Frame = +1
Query: 4 KDVVTWSCIIEGYSRNVDTAKEAIKLFCEMQSEGIPPNSVTLLSVISACTNLLLIGYARG 183
KD V+WS +I Y + KEA+ LF EMQ +G+ P+++T L+V+SAC + L+ +
Sbjct: 395 KDSVSWSTLITAYGLH-GHGKEALCLFHEMQLQGVEPDAMTFLAVLSACNHSGLVKEGQQ 453
Query: 184 VHGYVLKSCLITELNIQN--SLISMYAKCGFLQDSLKIFKEMSQRDSVS-WTSIIGA 345
+ V K ++ L +++ L+ + K G + D+ I + M + S + W+S++ A
Sbjct: 454 IFDNVKKDGKVS-LTVEHYACLVDLLGKSGKVDDAFDILRAMPMKPSTTIWSSLVSA 509
Score = 58.5 bits (140), Expect = 5e-07
Identities = 33/94 (35%), Positives = 50/94 (53%)
Frame = +1
Query: 67 EAIKLFCEMQSEGIPPNSVTLLSVISACTNLLLIGYARGVHGYVLKSCLITELNIQNSLI 246
+ +K + E+ S I N+ + SVI AC+ + ++ VLKS L ++ I NS I
Sbjct: 9 QILKFYKELHSSDIYANAYIIPSVIKACSFSNCHHFGIQLYSIVLKSGLDSDFVICNSFI 68
Query: 247 SMYAKCGFLQDSLKIFKEMSQRDSVSWTSIIGAY 348
S YAK + +LK+F M +D +SW II Y
Sbjct: 69 SFYAKSSCTESALKVFDTMPLKDPISWNCIINGY 102
>sp|O65543.2|PP343_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31070, mitochondrial; Flags: Precursor
Length = 624
Score = 112 bits (280), Expect = 3e-23
Identities = 54/117 (46%), Positives = 81/117 (69%)
Frame = +1
Query: 4 KDVVTWSCIIEGYSRNVDTAKEAIKLFCEMQSEGIPPNSVTLLSVISACTNLLLIGYARG 183
+DVV WS +I GY+ D + E + L +M+ EGI NSVTLL+++SACTN L+ +A
Sbjct: 327 RDVVMWSSMISGYAETGDCS-EVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFAST 385
Query: 184 VHGYVLKSCLITELNIQNSLISMYAKCGFLQDSLKIFKEMSQRDSVSWTSIIGAYGL 354
VH +LK ++ + + N+LI MYAKCG L + ++F E++++D VSW+S+I AYGL
Sbjct: 386 VHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGL 442
Score = 65.1 bits (157), Expect = 6e-09
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Frame = +1
Query: 4 KDVVTWSCIIEGYSRNVDTAKEAIKLFCEMQSEGIPPNSVTLLSVISACTNLLL-IGYAR 180
K+ V+W+ +I G N + + LF MQ E + PN VTLLSV+ AC L +
Sbjct: 225 KNEVSWTAMISGCVAN-QNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVK 283
Query: 181 GVHGYVLKSCLITELNIQNSLISMYAKCGFLQDSLKIFKEMSQRDSVSWTSIIGAY 348
+HG+ + + + + ++MY +CG + S +F+ RD V W+S+I Y
Sbjct: 284 EIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGY 339