BLASTX nr result

ID: Cephaelis21_contig00054839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00054839
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002436506.1| hypothetical protein SORBIDRAFT_10g003875 [S...    69   5e-10
gb|EEC77095.1| hypothetical protein OsI_15508 [Oryza sativa Indi...    67   1e-09
ref|XP_002452333.1| hypothetical protein SORBIDRAFT_04g023880 [S...    67   2e-09
gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...    66   3e-09
emb|CAE04660.2| OSJNBa0061G20.16 [Oryza sativa Japonica Group]         65   6e-09

>ref|XP_002436506.1| hypothetical protein SORBIDRAFT_10g003875 [Sorghum bicolor]
           gi|241914729|gb|EER87873.1| hypothetical protein
           SORBIDRAFT_10g003875 [Sorghum bicolor]
          Length = 984

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 42/120 (35%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
 Frame = +2

Query: 14  HIGGEFTWWSPKAELPRCRARLDRACANIKWKTMVSQAQVSPLFSHCSDHAPIWIELISS 193
           ++ G    WS +   P    RLDRA AN+ W        +  L S CSDH+P+ ++L S 
Sbjct: 209 YLNGRLYTWSSRRSTPTLE-RLDRAFANVDWLEAFPSHHLRCLSSDCSDHSPLLLQLCSQ 267

Query: 194 KLVFDVGRRKRPVRFEASWTKYDEFEDVVKNTWDKESAKDFGQRLLDSK-----RAFRKW 358
                    K   RFEA WT+ D F++VV + WD E       RLLD K     +A + W
Sbjct: 268 PWA------KSRFRFEAFWTRLDGFQEVVADAWDAELPGADPCRLLDFKLRKTAKALQSW 321


>gb|EEC77095.1| hypothetical protein OsI_15508 [Oryza sativa Indica Group]
          Length = 1296

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 45/133 (33%), Positives = 65/133 (48%), Gaps = 5/133 (3%)
 Frame = +2

Query: 5   DIGHIGGEFTWWSPKAELPRCRARLDRACANIKWKTMVSQAQVSPLFSHCSDHAPIWIEL 184
           D+G  G   T+ + +      + RLDRA A+ KW+ +  +AQVS L S CSDH+PI +E 
Sbjct: 545 DLGFKGVPHTYDNRRDGWRNVKVRLDRAVADDKWRDLFPEAQVSHLVSPCSDHSPILLEF 604

Query: 185 ISSKLVFDVGR-RKRPVRFEASWTKYDEFEDVVKNTWDKESAK----DFGQRLLDSKRAF 349
           I    V D  R R++ +R+E  W +  E   V++  W     K    D    L     A 
Sbjct: 605 I----VKDTTRPRQKCLRYEIVWEREPESVQVIEEAWINAGVKTDLGDINIALGRVMSAL 660

Query: 350 RKWGGEVVRGLDR 388
           R WG   V+ + R
Sbjct: 661 RSWGKTKVKNVGR 673


>ref|XP_002452333.1| hypothetical protein SORBIDRAFT_04g023880 [Sorghum bicolor]
           gi|241932164|gb|EES05309.1| hypothetical protein
           SORBIDRAFT_04g023880 [Sorghum bicolor]
          Length = 925

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/118 (30%), Positives = 57/118 (48%)
 Frame = +2

Query: 5   DIGHIGGEFTWWSPKAELPRCRARLDRACANIKWKTMVSQAQVSPLFSHCSDHAPIWIEL 184
           D+G+ G  +TW + +        RLDR+  N  W +    + V  L    SDHAPI   L
Sbjct: 31  DLGYSGPTYTWTNKRFNTIPTFQRLDRSLGNANWCSAFPSSTVFHLPMLKSDHAPILTML 90

Query: 185 ISSKLVFDVGRRKRPVRFEASWTKYDEFEDVVKNTWDKESAKDFGQRLLDSKRAFRKW 358
            SS     + +  +P RFE  W    +F +V +++WD+ +++ F Q+        RKW
Sbjct: 91  KSS-----ISKTAKPFRFENYWLLEQDFNEVARSSWDRSASRSFNQKATYLASDLRKW 143


>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 855

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 41/128 (32%), Positives = 63/128 (49%)
 Frame = +2

Query: 5   DIGHIGGEFTWWSPKAELPRCRARLDRACANIKWKTMVSQAQVSPLFSHCSDHAPIWIEL 184
           D+G  G +FTW   + E      RLDR     + +    +A V+ L    SDHAPI+I+L
Sbjct: 585 DMGFKGNKFTWKRGRVESTFVAKRLDRVLCRPQTRLKWQEASVTHLPFFASDHAPIYIQL 644

Query: 185 ISSKLVFDVGRRKRPVRFEASWTKYDEFEDVVKNTWDKESAKDFGQRLLDSKRAFRKWGG 364
              +        +RP RFEA+W  +  F+D+++ +W+ E         L SK   +KW  
Sbjct: 645 ---EPEVRSNPLRRPFRFEAAWLTHSGFKDLLQASWNTEGETPVALAALKSK--LKKWNR 699

Query: 365 EVVRGLDR 388
           EV   ++R
Sbjct: 700 EVFGDVNR 707


>emb|CAE04660.2| OSJNBa0061G20.16 [Oryza sativa Japonica Group]
          Length = 1285

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 44/133 (33%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
 Frame = +2

Query: 5    DIGHIGGEFTWWSPKAELPRCRARLDRACANIKWKTMVSQAQVSPLFSHCSDHAPIWIEL 184
            D+G  G   T+ + +      + RLDRA A+ KW+ +  +AQVS L S CSDH+PI +E 
Sbjct: 720  DLGFKGVPHTYDNRRDGWRNVKVRLDRAVADDKWRDLFPEAQVSHLVSPCSDHSPILLEF 779

Query: 185  ISSKLVFDVGR-RKRPVRFEASWTKYDEFEDVVKNTWDKESAK----DFGQRLLDSKRAF 349
            I    V D  R R++ + +E  W +  E   V++  W     K    D    L     A 
Sbjct: 780  I----VKDTTRPRQKCLHYEIVWEREPESVQVIEEAWINAGVKTDLGDINIALGRVMSAL 835

Query: 350  RKWGGEVVRGLDR 388
            R WG   V+ + R
Sbjct: 836  RSWGKTKVKNVGR 848


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