BLASTX nr result

ID: Cephaelis21_contig00054736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00054736
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38481.3| unnamed protein product [Vitis vinifera]              137   7e-31
ref|XP_002520501.1| pentatricopeptide repeat-containing protein,...   129   2e-28
ref|XP_004134800.1| PREDICTED: pentatricopeptide repeat-containi...   128   4e-28
ref|XP_002868131.1| predicted protein [Arabidopsis lyrata subsp....   123   1e-26
ref|XP_003594259.1| Thymidine kinase [Medicago truncatula] gi|35...   122   4e-26

>emb|CBI38481.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score =  137 bits (346), Expect = 7e-31
 Identities = 65/93 (69%), Positives = 78/93 (83%)
 Frame = +2

Query: 2   VSWNSMIAGYVQKGLEDVALNMYHKMRKDGLIPDHHTLSSVFRACASLAILDQGKQAHAL 181
           +SWN+MIAGYVQKGLE+  LN+Y +MR+ GL PD +T +SVFRACA+LA L++GKQAH +
Sbjct: 158 ISWNAMIAGYVQKGLEEEGLNLYDEMRQSGLTPDQYTFASVFRACATLATLEKGKQAHCV 217

Query: 182 WIKSQKNGNLVVNSALMDMYFKCSSLSDGHLVF 280
            IKSQ   N+VVNSALMDMYFKCSSL DGH VF
Sbjct: 218 MIKSQIKENVVVNSALMDMYFKCSSLYDGHRVF 250


>ref|XP_002520501.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540343|gb|EEF41914.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 383

 Score =  129 bits (324), Expect = 2e-28
 Identities = 58/93 (62%), Positives = 75/93 (80%)
 Frame = +2

Query: 2   VSWNSMIAGYVQKGLEDVALNMYHKMRKDGLIPDHHTLSSVFRACASLAILDQGKQAHAL 181
           +SWN+MIAGYVQ GLE++ L++Y+KMR++GL PD +T +S FRACA+LA L  GK+AH +
Sbjct: 75  ISWNAMIAGYVQSGLEEIGLSLYYKMRQNGLTPDQYTFASAFRACAALATLQHGKKAHGV 134

Query: 182 WIKSQKNGNLVVNSALMDMYFKCSSLSDGHLVF 280
            IK     N+VVNSAL+DMYFKCSSL+DGH  F
Sbjct: 135 MIKCNLRENVVVNSALIDMYFKCSSLTDGHKAF 167


>ref|XP_004134800.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g16470-like [Cucumis sativus]
           gi|449526397|ref|XP_004170200.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g16470-like [Cucumis sativus]
          Length = 486

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/93 (66%), Positives = 74/93 (79%)
 Frame = +2

Query: 2   VSWNSMIAGYVQKGLEDVALNMYHKMRKDGLIPDHHTLSSVFRACASLAILDQGKQAHAL 181
           VSWNS+IAGYVQKGL +V L  Y KMR+ GL+PD +T +SV RACASLA L+ GK+AH +
Sbjct: 155 VSWNSLIAGYVQKGLAEVGLEFYLKMRQSGLMPDQYTFASVLRACASLASLEHGKRAHGV 214

Query: 182 WIKSQKNGNLVVNSALMDMYFKCSSLSDGHLVF 280
            IK Q   N+VV+SAL+DMYFKCSSLSDGH  F
Sbjct: 215 LIKCQIGDNVVVSSALVDMYFKCSSLSDGHKAF 247


>ref|XP_002868131.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313967|gb|EFH44390.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 484

 Score =  123 bits (309), Expect = 1e-26
 Identities = 54/94 (57%), Positives = 75/94 (79%)
 Frame = +2

Query: 2   VSWNSMIAGYVQKGLEDVALNMYHKMRKDGLIPDHHTLSSVFRACASLAILDQGKQAHAL 181
           + WN+MI+GYVQKGLE   L +Y+ MR++G++PD +T +SVFR C++LA L+ GK+AHA+
Sbjct: 158 IPWNAMISGYVQKGLEQEGLYIYYDMRQNGIVPDQYTFASVFRVCSALASLEHGKRAHAV 217

Query: 182 WIKSQKNGNLVVNSALMDMYFKCSSLSDGHLVFE 283
            IK     N++V+SAL+DMYFKCSS SDGH VF+
Sbjct: 218 MIKRHIKSNIIVDSALVDMYFKCSSFSDGHKVFD 251


>ref|XP_003594259.1| Thymidine kinase [Medicago truncatula] gi|355483307|gb|AES64510.1|
           Thymidine kinase [Medicago truncatula]
          Length = 644

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/93 (59%), Positives = 75/93 (80%)
 Frame = +2

Query: 5   SWNSMIAGYVQKGLEDVALNMYHKMRKDGLIPDHHTLSSVFRACASLAILDQGKQAHALW 184
           +WN+MIAGYVQKGLE+V L  +++MR+  L PD +T +SVFRACA+LA+L+ G+QAH + 
Sbjct: 239 AWNAMIAGYVQKGLEEVGLETFYEMRQASLRPDQYTFASVFRACATLALLEPGRQAHGVM 298

Query: 185 IKSQKNGNLVVNSALMDMYFKCSSLSDGHLVFE 283
           +K Q   N+VVNSAL+DMYFKCS + DG L+F+
Sbjct: 299 LKCQIGDNVVVNSALIDMYFKCSCICDGRLLFD 331


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