BLASTX nr result

ID: Cephaelis21_contig00054721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00054721
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P94210.1|DHLO_AGRVI RecName: Full=Protein ocs; Includes: RecN...    81   1e-13
ref|YP_002540138.1| D-vitopine dehydrogenase [Agrobacterium viti...    75   5e-12
ref|NP_059680.1| hypothetical protein pTi_008 [Agrobacterium tum...    75   7e-12
ref|YP_002540153.1| D-vitopine dehydrogenase [Agrobacterium viti...    63   2e-08
ref|YP_471679.1| D-lysopine dehydrogenase/D-octopine dehydrogena...    63   3e-08

>sp|P94210.1|DHLO_AGRVI RecName: Full=Protein ocs; Includes: RecName: Full=D-lysopine
           dehydrogenase; AltName: Full=Lysopine synthase;
           Includes: RecName: Full=D-octopine dehydrogenase;
           AltName: Full=Octopine synthase
           gi|1814328|gb|AAB41877.1| Ocs [Agrobacterium vitis]
          Length = 358

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
 Frame = +1

Query: 100 RTGKTYCVTVWAPPKHRANFNLVAATGLLELSGPTTG-EFFPTLERDLGRAISSVNFIIV 276
           R G+T   ++WAP  +R++FN V   G LEL GP  G +F P LE DLG AIS   FI +
Sbjct: 23  RLGQT--PSIWAPISNRSSFNDVRCLGSLELVGPDYGGDFQPRLEDDLGTAISGAAFIFL 80

Query: 277 AVPTLGHPDILKHLAEHDLNTSILIALPG 363
            VPTLG   IL+ LA+ +L+ S+L+ALPG
Sbjct: 81  TVPTLGQQGILRELAKFNLSNSVLVALPG 109


>ref|YP_002540138.1| D-vitopine dehydrogenase [Agrobacterium vitis S4]
           gi|1174970|sp|Q04554.1|VIS_AGRVS RecName: Full=Vitopine
           synthase gi|149134|gb|AAA25044.1| vitopine synthase
           [Plasmid pTiS4] gi|221738919|gb|ACM39698.1| D-vitopine
           dehydrogenase [Agrobacterium vitis S4]
           gi|384293|prf||1905378A vitopine synthase
          Length = 360

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 41/89 (46%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = +1

Query: 100 RTGKTYCVTVWAPPKHRANFNLVAATGLLELSGPT-TGEFFPTLERDLGRAISSVNFIIV 276
           R  +     +WAP  +R NFN V   G LEL GP   G F P LE DL  AI    FI +
Sbjct: 23  RLNEEVTAVIWAPTTNRRNFNEVRGIGTLELVGPDYEGAFTPQLEDDLEAAILDAEFIFL 82

Query: 277 AVPTLGHPDILKHLAEHDLNTSILIALPG 363
            VPTL    IL+ L + DL+ ++LIALPG
Sbjct: 83  TVPTLAQEGILRELVKFDLSETVLIALPG 111


>ref|NP_059680.1| hypothetical protein pTi_008 [Agrobacterium tumefaciens]
           gi|61222616|sp|P0A394.1|DHLO_AGRT4 RecName: Full=Protein
           ocs; Includes: RecName: Full=D-lysopine dehydrogenase;
           AltName: Full=Lysopine synthase; Includes: RecName:
           Full=D-octopine dehydrogenase; AltName: Full=Octopine
           synthase gi|61222618|sp|P0A395.1|DHLO_AGRT9 RecName:
           Full=Protein ocs; Includes: RecName: Full=D-lysopine
           dehydrogenase; AltName: Full=Lysopine synthase;
           Includes: RecName: Full=D-octopine dehydrogenase;
           AltName: Full=Octopine synthase gi|39074|emb|CAA25174.1|
           unnamed protein product [Agrobacterium tumefaciens]
           gi|39110|emb|CAA23428.1| unnamed protein product
           [Agrobacterium tumefaciens] gi|8572681|gb|AAF77127.1|
           ocs [Agrobacterium tumefaciens]
          Length = 358

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/81 (49%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
 Frame = +1

Query: 124 TVWAPPKHRANFNLVAATGLLELSGPTTG-EFFPTLERDLGRAISSVNFIIVAVPTLGHP 300
           ++WAP  +R +FN V + G LEL GP  G +F P LE DL  AIS   FI + VPT+G  
Sbjct: 29  SIWAPISNRNSFNSVRSLGSLELVGPDYGGDFQPQLEDDLETAISGAAFIFLTVPTMGQQ 88

Query: 301 DILKHLAEHDLNTSILIALPG 363
            IL  LA  +L++S+L+ALPG
Sbjct: 89  GILCELANFNLSSSVLVALPG 109


>ref|YP_002540153.1| D-vitopine dehydrogenase [Agrobacterium vitis S4]
           gi|221738934|gb|ACM39713.1| D-vitopine dehydrogenase
           [Agrobacterium vitis S4]
          Length = 100

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
 Frame = +1

Query: 103 TGKTYCVTVWAPPKHRANFNLVAATGLLELSGPTTG-EFFPTLERDLGRAISSVNFIIVA 279
           +G+ + V +WAPP +R+N+  V +   L+L GPT G  F P LE DL   IS   F+ + 
Sbjct: 25  SGRVHAV-IWAPPSNRSNYTQVRSIVTLQLVGPTYGGSFEPQLEDDLQAIISDAEFVFLT 83

Query: 280 VPTLGHPDILKHL 318
           VPTLGH  IL+ L
Sbjct: 84  VPTLGHEGILRQL 96


>ref|YP_471679.1| D-lysopine dehydrogenase/D-octopine dehydrogenase [Rhizobium etli
           CFN 42] gi|86283890|gb|ABC92952.1| D-lysopine
           dehydrogenase/D-octopine dehydrogenase protein
           [Rhizobium etli CFN 42]
          Length = 351

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
 Frame = +1

Query: 103 TGKTYCVTVWAPPKHRANFNLVAATGLLELSGPTTGEFFPTLERDLGRAISSVNFIIVAV 282
           + + + V++W  P H  N   +A  GL E  G   G F+PT+  DLG A+S    IIV +
Sbjct: 20  SSRNHRVSIWTHPSHPGNSIKIANEGL-EAKGAVVGHFYPTILPDLGHAVSEAEAIIVTI 78

Query: 283 PT-LGHPDILK-HLAEHDLNTSILIALPG 363
           P   G  + LK  LAEHDL + ILI +PG
Sbjct: 79  PAKAGVKEELKVRLAEHDLASKILIWVPG 107


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