BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00054716
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL i...    57   2e-06
gb|AAG34875.1|AF261020_3 putative chloroplast RNA helicase VDL i...    57   2e-06
gb|AAG34874.1|AF261020_2 putative chloroplast RNA helicase VDL i...    57   2e-06
gb|AAG34885.1|AF261030_1 putative chloroplast RNA helicase VDL' ...    54   1e-05
gb|AAG38497.1|AF261032_5 putative chloroplast RNA helicase VDL' ...    54   1e-05

>gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum]
           gi|11385590|gb|AAG34876.1|AF261021_1 putative
           chloroplast RNA helicase VDL isoform 1 [Nicotiana
           tabacum]
          Length = 466

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
 Frame = +1

Query: 7   SASHFPSVSWTSSAKFRRSCSCLSFVNPNNLFLFINYRNRTKCEPLRAS-SFVQLAGAAD 183
           SA+   ++ WTSS   R S        PN  +    +  R K  PL AS S   +    +
Sbjct: 5   SATQLHTLLWTSSLN-RTS----HHFKPNYTYRTPKFLFRQK--PLIASFSTSDVEARTE 57

Query: 184 AIDKEFSTLRELCEGYVPEHVIKRMEEIGYVVP 282
             D   +TLRELC G+VPEHVI+R+EE+GYV+P
Sbjct: 58  TKDSSTATLRELCHGHVPEHVIRRVEEVGYVIP 90


>gb|AAG34875.1|AF261020_3 putative chloroplast RNA helicase VDL isoform 3 [Nicotiana tabacum]
           gi|11385594|gb|AAG34878.1|AF261023_1 putative
           chloroplast RNA helicase VDL isoform 3 [Nicotiana
           tabacum]
          Length = 168

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
 Frame = +1

Query: 7   SASHFPSVSWTSSAKFRRSCSCLSFVNPNNLFLFINYRNRTKCEPLRAS-SFVQLAGAAD 183
           SA+   ++ WTSS   R S        PN  +    +  R K  PL AS S   +    +
Sbjct: 5   SATQLHTLLWTSSLN-RTS----HHFKPNYTYRTPKFLFRQK--PLIASFSTSDVEARTE 57

Query: 184 AIDKEFSTLRELCEGYVPEHVIKRMEEIGYVVP 282
             D   +TLRELC G+VPEHVI+R+EE+GYV+P
Sbjct: 58  TKDSSTATLRELCHGHVPEHVIRRVEEVGYVIP 90


>gb|AAG34874.1|AF261020_2 putative chloroplast RNA helicase VDL isoform 2 [Nicotiana tabacum]
           gi|11385592|gb|AAG34877.1|AF261022_1 putative
           chloroplast RNA helicase VDL isoform 2 [Nicotiana
           tabacum]
          Length = 132

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
 Frame = +1

Query: 7   SASHFPSVSWTSSAKFRRSCSCLSFVNPNNLFLFINYRNRTKCEPLRAS-SFVQLAGAAD 183
           SA+   ++ WTSS   R S        PN  +    +  R K  PL AS S   +    +
Sbjct: 5   SATQLHTLLWTSSLN-RTS----HHFKPNYTYRTPKFLFRQK--PLIASFSTSDVEARTE 57

Query: 184 AIDKEFSTLRELCEGYVPEHVIKRMEEIGYVVP 282
             D   +TLRELC G+VPEHVI+R+EE+GYV+P
Sbjct: 58  TKDSSTATLRELCHGHVPEHVIRRVEEVGYVIP 90


>gb|AAG34885.1|AF261030_1 putative chloroplast RNA helicase VDL' isoform 7 [Nicotiana
           tabacum] gi|11596139|gb|AAG38499.1|AF261032_7 putative
           chloroplast RNA helicase VDL' isoform 7 [Nicotiana
           tabacum]
          Length = 137

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
 Frame = +1

Query: 7   SASHFPSVSWTSSAKFRRSCSCLSFVNPNNLFLFINYRNRTKCEPLRAS-SFVQLAGAAD 183
           SA+   ++ WTSS   R S        PN  +    +  R K  PL AS S   +    +
Sbjct: 5   SATQLHTLLWTSSLN-RTS----HHFKPNYTYRTPKFLFRQK--PLIASFSTSDIEARTE 57

Query: 184 AIDKEFSTLRELCEGYVPEHVIKRMEEIGYVVP 282
             D   +T RELC G+VPEHVI+R+EE+GYV+P
Sbjct: 58  TKDSSTATPRELCHGHVPEHVIRRVEEVGYVIP 90


>gb|AAG38497.1|AF261032_5 putative chloroplast RNA helicase VDL' isoform 5 [Nicotiana
           tabacum]
          Length = 289

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
 Frame = +1

Query: 7   SASHFPSVSWTSSAKFRRSCSCLSFVNPNNLFLFINYRNRTKCEPLRAS-SFVQLAGAAD 183
           SA+   ++ WTSS   R S        PN  +    +  R K  PL AS S   +    +
Sbjct: 5   SATQLHTLLWTSSLN-RTS----HHFKPNYTYRTPKFLFRQK--PLIASFSTSDIEARTE 57

Query: 184 AIDKEFSTLRELCEGYVPEHVIKRMEEIGYVVP 282
             D   +T RELC G+VPEHVI+R+EE+GYV+P
Sbjct: 58  TKDSSTATPRELCHGHVPEHVIRRVEEVGYVIP 90