BLASTX nr result

ID: Cephaelis21_contig00054638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00054638
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   104   7e-21
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   101   7e-20
ref|YP_004222309.1| hypothetical protein BevumaM_p074 [Beta vulg...   100   1e-19
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas...    97   1e-18
gb|ABD96948.1| hypothetical protein [Cleome spinosa]                   92   4e-17

>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  104 bits (260), Expect = 7e-21
 Identities = 50/87 (57%), Positives = 62/87 (71%)
 Frame = +2

Query: 2   RKRVSPRCLIKVDPRKAYDSVS*TFLRVVLRGLGFPSQFVSWFT*YVETASYSIKINGGI 181
           RK +SPRC++KVD RKAYDSV  +FL  +L   GFPS+FV W    V T SYS+ +NG  
Sbjct: 572 RKHMSPRCIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIP 631

Query: 182 YGWFEGRKGLRQGDPLSPYLFLTCIEY 262
              F+ RKGLRQGDP+SP+LF  C+EY
Sbjct: 632 TQPFQARKGLRQGDPMSPFLFALCMEY 658


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/87 (58%), Positives = 62/87 (71%)
 Frame = +2

Query: 2   RKRVSPRCLIKVDPRKAYDSVS*TFLRVVLRGLGFPSQFVSWFT*YVETASYSIKINGGI 181
           R+ VSPRC+IKVD RKAYDSV   FL  +L+ LGFPS F+ W    V+T SYSI +NG  
Sbjct: 575 RRHVSPRCVIKVDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIP 634

Query: 182 YGWFEGRKGLRQGDPLSPYLFLTCIEY 262
              F+ +KGLRQGDPLSP+LF   +EY
Sbjct: 635 SIPFDAQKGLRQGDPLSPFLFALSMEY 661


>ref|YP_004222309.1| hypothetical protein BevumaM_p074 [Beta vulgaris subsp. maritima]
           gi|346683183|ref|YP_004842114.1| hypothetical protein
           BemaM_p069 [Beta macrocarpa]
           gi|319439824|emb|CBX33299.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500101|emb|CBX24919.1|
           hypothetical protein [Beta macrocarpa]
          Length = 238

 Score =  100 bits (249), Expect = 1e-19
 Identities = 49/87 (56%), Positives = 63/87 (72%)
 Frame = +2

Query: 2   RKRVSPRCLIKVDPRKAYDSVS*TFLRVVLRGLGFPSQFVSWFT*YVETASYSIKINGGI 181
           +K VSPRC+IKVD RKAYDS+  +FL+ +L  LGFPSQF++W    V T SYSI +NG  
Sbjct: 38  QKAVSPRCMIKVDLRKAYDSIEWSFLQCMLSELGFPSQFITWIMECVTTVSYSILLNGKP 97

Query: 182 YGWFEGRKGLRQGDPLSPYLFLTCIEY 262
              F  +KG+RQGDP+SP+LF   +EY
Sbjct: 98  TTPFPSKKGVRQGDPMSPFLFAIGMEY 124


>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 402

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/87 (50%), Positives = 63/87 (72%)
 Frame = +2

Query: 2   RKRVSPRCLIKVDPRKAYDSVS*TFLRVVLRGLGFPSQFVSWFT*YVETASYSIKINGGI 181
           RK +SPRC++K+D +KAY+SV   F++ ++  LGF  +FV+W    + TASY+  ING +
Sbjct: 255 RKGISPRCMVKIDLQKAYNSVEWPFIKHLMLELGFSYKFVNWVMGCLTTASYTFNINGDL 314

Query: 182 YGWFEGRKGLRQGDPLSPYLFLTCIEY 262
              F  +KGLRQGDP+SPYLF+ C+EY
Sbjct: 315 TRPFAAKKGLRQGDPISPYLFVICMEY 341


>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 41/86 (47%), Positives = 60/86 (69%)
 Frame = +2

Query: 2   RKRVSPRCLIKVDPRKAYDSVS*TFLRVVLRGLGFPSQFVSWFT*YVETASYSIKINGGI 181
           R   S R ++K+D RKA+D+VS  F+  +++ L  P  FV+W    +ET  +S+ ING +
Sbjct: 34  RPNTSKRAMLKIDLRKAFDTVSWEFITKIMQALNLPRTFVTWVKVCMETPKFSVSINGEL 93

Query: 182 YGWFEGRKGLRQGDPLSPYLFLTCIE 259
            G+F+GR+GLRQGDPLSPYLF+  +E
Sbjct: 94  AGYFKGRRGLRQGDPLSPYLFIMSME 119


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