BLASTX nr result

ID: Cephaelis21_contig00054611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00054611
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor...   189   3e-46
ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor...   189   3e-46
ref|XP_003532351.1| PREDICTED: LOW QUALITY PROTEIN: putative pre...   184   6e-45
gb|AFW61762.1| putative RNA helicase family protein [Zea mays]        182   2e-44
ref|XP_003619695.1| ATP-dependent RNA helicase dhx8 [Medicago tr...   182   2e-44

>ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16 isoform 2 [Glycine max]
          Length = 1035

 Score =  189 bits (479), Expect = 3e-46
 Identities = 94/107 (87%), Positives = 100/107 (93%), Gaps = 1/107 (0%)
 Frame = -2

Query: 329 LPTELQAKIFEPSPKGARKVVLATNIAETSLTIDGITYVIDPGFCKMKSYNPRAGMESLS 150
           LPTELQAKIFEP+P+GARKVVLATNIAETSLTIDGI YVIDPGFCKMKSYNPR GMESL 
Sbjct: 647 LPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKSYNPRTGMESLL 706

Query: 149 ITPISKASANQRAGRSGRTGPGKCFRLYTKSCY-NELDENTVPEIRR 12
           +TPISKASANQRAGRSGRTGPGKCFRLYT   Y N+LD+NTVPEI+R
Sbjct: 707 VTPISKASANQRAGRSGRTGPGKCFRLYTAYNYHNDLDDNTVPEIQR 753


>ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16 isoform 1 [Glycine max]
          Length = 1044

 Score =  189 bits (479), Expect = 3e-46
 Identities = 94/107 (87%), Positives = 100/107 (93%), Gaps = 1/107 (0%)
 Frame = -2

Query: 329 LPTELQAKIFEPSPKGARKVVLATNIAETSLTIDGITYVIDPGFCKMKSYNPRAGMESLS 150
           LPTELQAKIFEP+P+GARKVVLATNIAETSLTIDGI YVIDPGFCKMKSYNPR GMESL 
Sbjct: 656 LPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKSYNPRTGMESLL 715

Query: 149 ITPISKASANQRAGRSGRTGPGKCFRLYTKSCY-NELDENTVPEIRR 12
           +TPISKASANQRAGRSGRTGPGKCFRLYT   Y N+LD+NTVPEI+R
Sbjct: 716 VTPISKASANQRAGRSGRTGPGKCFRLYTAYNYHNDLDDNTVPEIQR 762


>ref|XP_003532351.1| PREDICTED: LOW QUALITY PROTEIN: putative pre-mRNA-splicing factor
           ATP-dependent RNA helicase DHX16-like [Glycine max]
          Length = 704

 Score =  184 bits (467), Expect = 6e-45
 Identities = 92/109 (84%), Positives = 99/109 (90%), Gaps = 3/109 (2%)
 Frame = -2

Query: 329 LPTELQAKIFEPSPKGARKVVLATNIAETSLTIDGITYVIDPGFCKMKSYNPRAGMESLS 150
           LPTELQAKIFEP+P+GARKVVLATNIAETSLTIDGI YVIDPGFCKMKSYNPR GMESL 
Sbjct: 314 LPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKSYNPRTGMESLL 373

Query: 149 ITPISKASANQRAGRSGRTGPGKCFRLYT---KSCYNELDENTVPEIRR 12
           +TPISKASANQRAGRSGR GPGKCFRLYT      +N+LD+NTVPEI+R
Sbjct: 374 VTPISKASANQRAGRSGRMGPGKCFRLYTAYNDYYHNDLDDNTVPEIQR 422


>gb|AFW61762.1| putative RNA helicase family protein [Zea mays]
          Length = 639

 Score =  182 bits (463), Expect = 2e-44
 Identities = 91/107 (85%), Positives = 99/107 (92%), Gaps = 1/107 (0%)
 Frame = -2

Query: 329 LPTELQAKIFEPSPKGARKVVLATNIAETSLTIDGITYVIDPGFCKMKSYNPRAGMESLS 150
           LPTELQAKIFEP+P+GARKVVLATNIAETSLTIDGI YVIDPGFCK+KSYNPR GMESL 
Sbjct: 250 LPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKIKSYNPRTGMESLL 309

Query: 149 ITPISKASANQRAGRSGRTGPGKCFRLYTKSCY-NELDENTVPEIRR 12
           I PISKASANQRAGRSGRTGPGKCFRLYT   Y ++L++NTVPEI+R
Sbjct: 310 INPISKASANQRAGRSGRTGPGKCFRLYTSYNYMHDLEDNTVPEIQR 356


>ref|XP_003619695.1| ATP-dependent RNA helicase dhx8 [Medicago truncatula]
           gi|355494710|gb|AES75913.1| ATP-dependent RNA helicase
           dhx8 [Medicago truncatula]
          Length = 972

 Score =  182 bits (463), Expect = 2e-44
 Identities = 90/107 (84%), Positives = 98/107 (91%), Gaps = 1/107 (0%)
 Frame = -2

Query: 329 LPTELQAKIFEPSPKGARKVVLATNIAETSLTIDGITYVIDPGFCKMKSYNPRAGMESLS 150
           LPTE+QAKIFEP+PKGARKVVLATNIAETSLTIDGI YVIDPGFCKMKSYNPR GMESL 
Sbjct: 574 LPTEIQAKIFEPTPKGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKSYNPRTGMESLL 633

Query: 149 ITPISKASANQRAGRSGRTGPGKCFRLYTK-SCYNELDENTVPEIRR 12
           +TPISKASA QRAGRSGRTGPGKCFRLYT  S  N++++NT PEI+R
Sbjct: 634 VTPISKASAMQRAGRSGRTGPGKCFRLYTSYSFQNDMEDNTTPEIQR 680


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