BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00054588
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637626.1| Pentatricopeptide repeat-containing protein ...   115   3e-24
ref|XP_003637381.1| Pentatricopeptide repeat-containing protein ...   115   3e-24
ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containi...   108   5e-22
ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22
ref|XP_002524030.1| pentatricopeptide repeat-containing protein,...   107   1e-21

>ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503561|gb|AES84764.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  115 bits (289), Expect = 3e-24
 Identities = 61/120 (50%), Positives = 79/120 (65%), Gaps = 2/120 (1%)
 Frame = +3

Query: 3   AIAAFSAMRSHNISPGLRSWNRLLAHFNDAGLMEQVMLMYSEMMYSGVSPSVGTRNIVIH 182
           A A FS MR+  + P L  WN LL  FN +GL+ QV LMYS+M++ GV P V + N+++H
Sbjct: 78  ASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVH 137

Query: 183 CLCKVGKVKEAVQMLRNCSL--SDSVSYNIVIWGLCNNGLQKSGFGLVSEMVKRCVNIDS 356
            LCKVG +  A+  LRN  +   D+V+YN VIWG C  GL   GFGL+SEMVKR +  DS
Sbjct: 138 SLCKVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDS 197


>ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503316|gb|AES84519.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  115 bits (289), Expect = 3e-24
 Identities = 61/120 (50%), Positives = 79/120 (65%), Gaps = 2/120 (1%)
 Frame = +3

Query: 3   AIAAFSAMRSHNISPGLRSWNRLLAHFNDAGLMEQVMLMYSEMMYSGVSPSVGTRNIVIH 182
           A A FS MR+  + P L  WN LL  FN +GL+ QV LMYS+M++ GV P V + N+++H
Sbjct: 78  ASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVH 137

Query: 183 CLCKVGKVKEAVQMLRNCSL--SDSVSYNIVIWGLCNNGLQKSGFGLVSEMVKRCVNIDS 356
            LCKVG +  A+  LRN  +   D+V+YN VIWG C  GL   GFGL+SEMVKR +  DS
Sbjct: 138 SLCKVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDS 197


>ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  108 bits (270), Expect = 5e-22
 Identities = 55/111 (49%), Positives = 75/111 (67%)
 Frame = +3

Query: 24  MRSHNISPGLRSWNRLLAHFNDAGLMEQVMLMYSEMMYSGVSPSVGTRNIVIHCLCKVGK 203
           MR+ ++ P L  WN LL  FN +G + QV ++YSEM+  GV P+V + N+++H LCKVG 
Sbjct: 1   MRALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGD 60

Query: 204 VKEAVQMLRNCSLSDSVSYNIVIWGLCNNGLQKSGFGLVSEMVKRCVNIDS 356
           +  A+  LRN S+ D V+YN V+WG C  GL   GFGL+SEMVK+ V  DS
Sbjct: 61  LGLALGYLRN-SVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDS 110



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
 Frame = +3

Query: 36  NISPGLRSWNRLLAHFNDAGLMEQVMLMYSEMMYSGVSPSVGTRNIVIHCLCKVGKVKEA 215
           ++ P + +W  L+A +     ++    +Y +M+ SGV P V T + +++ LC+ GK+ EA
Sbjct: 231 DLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEA 290

Query: 216 VQMLR---NCSLS-DSVSYNIVIWGLCNNGLQKSGFGLVSEMVKRCVNID 353
             +LR   N  L  + VSY  +I  L  +G     F   S+MV R ++ID
Sbjct: 291 AMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISID 340


>ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|222862327|gb|EEE99833.1|
           predicted protein [Populus trichocarpa]
          Length = 864

 Score =  107 bits (268), Expect = 8e-22
 Identities = 52/112 (46%), Positives = 72/112 (64%), Gaps = 1/112 (0%)
 Frame = +3

Query: 24  MRSHNISPGLRSWNRLLAHFNDAGLMEQVMLMYSEMMYSGVSPSVGTRNIVIHCLCKVGK 203
           +R+H+I P L  WNRL+  FN  GL+ QV  +YSEM+  GV P+V T NI++H  CK+G 
Sbjct: 2   IRTHHIVPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGH 61

Query: 204 VKEAVQMLRNCSLS-DSVSYNIVIWGLCNNGLQKSGFGLVSEMVKRCVNIDS 356
           +  A+ ++RN  +  D+V+YN  IWG C  GL   GFG +S MVK+    DS
Sbjct: 62  LSLALDLIRNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDS 113



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
 Frame = +3

Query: 3    AIAAFSAMRSHNISPGLRSWNRLLAHFNDAGLMEQVMLMYSEMMYSGVSPSVGTRNIVIH 182
            A+A ++ M +  +SPG+R++N LL     AGLM +   + S+M  SG+ P     N +I 
Sbjct: 664  ALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLIS 723

Query: 183  CLCKVGKVKEAV----QMLRNCSLSDSVSYNIVIWGLCNNGLQKSGFGLVSEMVKRCV 344
               K+G  KEA+    +M+    +  + +YN++I      G       L++EM  R V
Sbjct: 724  GHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRV 781


>ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536757|gb|EEF38398.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1016

 Score =  107 bits (267), Expect = 1e-21
 Identities = 52/112 (46%), Positives = 73/112 (65%), Gaps = 1/112 (0%)
 Frame = +3

Query: 24  MRSHNISPGLRSWNRLLAHFNDAGLMEQVMLMYSEMMYSGVSPSVGTRNIVIHCLCKVGK 203
           MR HNI P L  WN+L+ HFN  GL+ QV  +Y+EM+ S V P+V T N+++H  CK+G 
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 204 VKEAVQMLRNCSLS-DSVSYNIVIWGLCNNGLQKSGFGLVSEMVKRCVNIDS 356
           +  A+ +LRN  +  D+V+YN VIWG C +GL    FG +S MVK+    D+
Sbjct: 61  LILALDLLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDT 112