BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00054545
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310252.1| predicted protein [Populus trichocarpa] gi|2...    40   8e-07
ref|XP_002521555.1| pentatricopeptide repeat-containing protein,...    45   2e-06
ref|XP_003594404.1| Pentatricopeptide repeat-containing protein ...    40   8e-06

>ref|XP_002310252.1| predicted protein [Populus trichocarpa] gi|222853155|gb|EEE90702.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score = 40.4 bits (93), Expect(2) = 8e-07
 Identities = 22/42 (52%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
 Frame = -3

Query: 222 KDVISWMSMIDANGVHETRADVIALFKIIGD--SNVLPNSVT 103
           K V+SW SMIDA G H    + + LFK +G   S VLPNS+T
Sbjct: 353 KTVVSWTSMIDAYGRHGHGDEALKLFKEMGQEGSRVLPNSLT 394



 Score = 37.4 bits (85), Expect(2) = 8e-07
 Identities = 19/33 (57%), Positives = 23/33 (69%)
 Frame = -2

Query: 103 ILVVLLACGI*GLVKQGLEYF*IFQEKYGMVPS 5
           +L VL ACG  GLVK+G E F   +EKYG+ PS
Sbjct: 395 LLAVLSACGHSGLVKEGQELFNSAREKYGLDPS 427


>ref|XP_002521555.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539233|gb|EEF40826.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 418

 Score = 44.7 bits (104), Expect(2) = 2e-06
 Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
 Frame = -3

Query: 231 IF*KDVISWMSMIDANGVHETRADVIALFKIIG--DSNVLPNSVTF 100
           IF KDV+SW SMIDA G H    + + LFK +G   + V PNS+TF
Sbjct: 337 IFRKDVVSWTSMIDAYGRHGNGYEALELFKKMGLLGNMVSPNSITF 382



 Score = 31.6 bits (70), Expect(2) = 2e-06
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = -2

Query: 100 LVVLLACGI*GLVKQGLEYF*IFQEKYG 17
           L VL ACG  GLV++G E F + ++KYG
Sbjct: 383 LAVLSACGHAGLVEEGRELFDLVRKKYG 410


>ref|XP_003594404.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355483452|gb|AES64655.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 516

 Score = 40.4 bits (93), Expect(2) = 8e-06
 Identities = 25/46 (54%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
 Frame = -3

Query: 231 IF*KDVISWMSMIDANGVHETRADVIALF-KIIGD-SNVLPNSVTF 100
           IF KDVISW  MID  G +    + + LF K++ D S VLPNSVTF
Sbjct: 316 IFQKDVISWTCMIDGYGRNGCGYEAVELFWKMMEDGSEVLPNSVTF 361



 Score = 33.9 bits (76), Expect(2) = 8e-06
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = -2

Query: 100 LVVLLACGI*GLVKQGLEYF*IFQEKYGMVP 8
           L VL ACG  GLV++G + F I +EKYG+ P
Sbjct: 362 LSVLSACGHSGLVEEGKQCFNIMKEKYGIDP 392