BLASTX nr result

ID: Cephaelis21_contig00053901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00053901
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]    74   2e-11
gb|AAP53789.1| retrotransposon protein, putative, unclassified [...    72   4e-11
gb|ABA95319.1| retrotransposon protein, putative, unclassified [...    71   1e-10
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]         70   1e-10
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]         70   1e-10

>emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
          Length = 1593

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/84 (42%), Positives = 49/84 (58%)
 Frame = -3

Query: 268  GSKIHPVFHVSLLKKRIGSEQVLSTPLPELNEHKYCPLLPDSILHTRLILRNQKQVVH*L 89
            GS+IHPVFHVSLLKK+IG   + +  LP L E     L P  +L TR + +        L
Sbjct: 1243 GSRIHPVFHVSLLKKKIGEVAIANDELPPLTEEGVIRLQPRKVLSTRWVNKGSTSASESL 1302

Query: 88   INWKGFTGEEASWKDSGFIKQQFP 17
            + W+G   EEA+W+DS  + + FP
Sbjct: 1303 VLWEGLPEEEATWEDSQQLLRSFP 1326


>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/88 (39%), Positives = 51/88 (57%)
 Frame = -3

Query: 268  GSKIHPVFHVSLLKKRIGSEQVLSTPLPELNEHKYCPLLPDSILHTRLILRNQKQVVH*L 89
            G+ IHPVFHVS LKK +G+  +    LP +         P ++L  R+I R+ + V   L
Sbjct: 1524 GAGIHPVFHVSQLKKHLGARAIPMPNLPAIGPDGQIKTEPAAVLQRRMIPRHNEPVTQWL 1583

Query: 88   INWKGFTGEEASWKDSGFIKQQFPAFQP 5
            I W+  T  EA+W+D+ +I+  FP FQP
Sbjct: 1584 ILWENLTPAEATWEDASYIQAAFPNFQP 1611


>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/85 (42%), Positives = 48/85 (56%)
 Frame = -3

Query: 259  IHPVFHVSLLKKRIGSEQVLSTPLPELNEHKYCPLLPDSILHTRLILRNQKQVVH*LINW 80
            IHPVFHVS LKK +G+  V    LP +         P ++L  R+I RN   V   LI W
Sbjct: 871  IHPVFHVSQLKKHLGTHAVPMPNLPAVGPDGQIKTEPVAVLQRRMIPRNNVAVTQWLILW 930

Query: 79   KGFTGEEASWKDSGFIKQQFPAFQP 5
               T  EA+W+D+ +I++ FP FQP
Sbjct: 931  SNLTPAEATWEDASYIQKVFPNFQP 955


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/88 (40%), Positives = 47/88 (53%)
 Frame = -3

Query: 268  GSKIHPVFHVSLLKKRIGSEQVLSTPLPELNEHKYCPLLPDSILHTRLILRNQKQVVH*L 89
            GS IHPVFHVS LKK IGS  V    LP +         P ++L  R+I R    V   L
Sbjct: 1499 GSNIHPVFHVSQLKKHIGSRAVPMANLPSVGPDGQIKTEPVAVLKRRMIPRGGVAVTQWL 1558

Query: 88   INWKGFTGEEASWKDSGFIKQQFPAFQP 5
            + W   +  EA+W+D+  I+  FP+F P
Sbjct: 1559 VLWHNLSPSEATWEDASMIQSMFPSFNP 1586


>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
          Length = 1311

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/89 (41%), Positives = 50/89 (56%)
 Frame = -3

Query: 271  AGSKIHPVFHVSLLKKRIGSEQVLSTPLPELNEHKYCPLLPDSILHTRLILRNQKQVVH* 92
            A S+IHPVFHVS LKK IG + V    LP  +++      P ++L  RLI +N   VV  
Sbjct: 1223 ASSQIHPVFHVSQLKKHIGPKVVPEPGLPLTDDNGNILSQPTAVLERRLIPQNNAPVVQW 1282

Query: 91   LINWKGFTGEEASWKDSGFIKQQFPAFQP 5
             + W       A+W+D+ FI + FPAF P
Sbjct: 1283 KVQWANLPLSAATWEDAAFISKVFPAFNP 1311


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