BLASTX nr result

ID: Cephaelis21_contig00053865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00053865
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298855.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...    64   1e-08
gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]          62   6e-08
ref|XP_003537341.1| PREDICTED: uncharacterized protein LOC100813...    61   8e-08
emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]    61   8e-08

>ref|XP_002298855.1| predicted protein [Populus trichocarpa] gi|222846113|gb|EEE83660.1|
           predicted protein [Populus trichocarpa]
          Length = 735

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
 Frame = +1

Query: 4   KYFHSKAKVRRRKNFISNLLIDD-IWVDDQEKLKDAAVQFFKKLYSEGNTLVTSSMRRGR 180
           K+FH+  K RR +N I  L + D  W  +   L+  AV F+K L+   +T+  ++     
Sbjct: 450 KFFHTLTKTRRMRNKICGLFLPDGSWCSEDNTLQVEAVNFYKSLFYYNDTIELNAFEGVT 509

Query: 181 FPKLHARELDNLAREVSREEIKKALFEMNPLKAPGIDRLH 300
            PKL +  +  LA+ V++EE+  AL  M   KAPG D  H
Sbjct: 510 IPKLSSEGVSELAKSVTKEEVDIALMSMGSYKAPGKDGFH 549


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268307|emb|CAB78601.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 929

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
 Frame = +1

Query: 7   YFHSKAKVRRRKNFISNLL-IDDIWVDDQEKLKDAAVQFFKKLYS-EGNTLVTSSMRRGR 180
           +FH+   +RRR+N I  L   +D WV ++E L+  A+ +++KLYS E  ++V  ++    
Sbjct: 169 FFHTSTVIRRRRNRIEMLKDSEDRWVTEKEALEKLAMDYYRKLYSLEDVSVVRGTLPTEG 228

Query: 181 FPKLHARELDNLAREVSREEIKKALFEMNPLKAPGID 291
           FP+L   E +NL R  +R+E+  A+  M   KAPG D
Sbjct: 229 FPRLTREEKNNLNRPFTRDEVVVAVRSMGRFKAPGPD 265


>gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 1613

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
 Frame = +1

Query: 4    KYFHSKAKVRRRKNFISNLLIDD-IWVDDQEKLKDAAVQFFKKLYSEGNTLVTSSMRRGR 180
            ++FH +   RR+ N I  L + D +W  D E L   A  F+K L+   + +    +    
Sbjct: 756  RFFHIQTLARRKHNKIHGLFLKDGVWETDPEVLSQEAESFYKSLFCHLDDVDLGCLGDVP 815

Query: 181  FPKLHARELDNLAREVSREEIKKALFEMNPLKAPGID 291
             P L+ +  +NL   V+ EE+K A+F MN  KAPG D
Sbjct: 816  LPSLNEKACNNLTAPVTMEEVKAAVFHMNSFKAPGPD 852


>ref|XP_003537341.1| PREDICTED: uncharacterized protein LOC100813042 [Glycine max]
          Length = 645

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/87 (37%), Positives = 51/87 (58%)
 Frame = +1

Query: 40  KNFISNLLIDDIWVDDQEKLKDAAVQFFKKLYSEGNTLVTSSMRRGRFPKLHARELDNLA 219
           KN I  LLID +WV D   +K+AA+ +FK  +SE N     ++   +FP L  RE ++L 
Sbjct: 102 KNSIQGLLIDGVWVHDPSSVKNAALHYFKDKFSEEN-YTRPTLDGVQFPSLGQREKESLV 160

Query: 220 REVSREEIKKALFEMNPLKAPGIDRLH 300
              S  +IK A+++    K+PG+D L+
Sbjct: 161 ARFSELDIKSAVWDCGGDKSPGLDGLN 187


>emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]
          Length = 1201

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/96 (36%), Positives = 54/96 (56%)
 Frame = +1

Query: 4   KYFHSKAKVRRRKNFISNLLIDDIWVDDQEKLKDAAVQFFKKLYSEGNTLVTSSMRRGRF 183
           K+FH  A  RRR NFIS+L +  I +  +E+LK+    +FK ++ E   +    +  G F
Sbjct: 346 KFFHRMANARRRGNFISSLTVRGIRLSKEEELKEGIGSYFKSMF-EDPIVRRPEVESGLF 404

Query: 184 PKLHARELDNLAREVSREEIKKALFEMNPLKAPGID 291
             L + + D L R+ S EE+ +AL ++   KAPG D
Sbjct: 405 NTLDSLDNDILERQFSNEEVLRALSDLGGDKAPGPD 440


Top