BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00053807
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...   115   4e-24
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677...   115   4e-24
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...   114   6e-24
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...   114   6e-24
emb|CAB75484.1| putative protein [Arabidopsis thaliana]               111   5e-23

>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
            42.57) [Arabidopsis thaliana]
          Length = 1662

 Score =  115 bits (288), Expect = 4e-24
 Identities = 52/113 (46%), Positives = 77/113 (68%)
 Frame = -1

Query: 364  LPVYAMSCFKIPNNVLHEIAGMIVRFR*NGDDKHQKICWVAWKKMSKPKELGGLGFKELR 185
            +PVYAMSCFK+P N++ EI  +++ F    + K ++I W+AWK++   K+ GGLGF++L 
Sbjct: 1182 MPVYAMSCFKLPLNIVSEIEALLMNFWWEKNAKKREIPWIAWKRLQYSKKEGGLGFRDLA 1241

Query: 184  AFNDTLLAKQLWQLITKPNLLMSTVMKAKYFHSVGILKAKSKPNASWVWKSWM 26
             FND LLAKQ+W++I  PN L + +MKA+YF    IL AK +   S+ W S +
Sbjct: 1242 KFNDALLAKQVWRMINNPNSLFARIMKARYFREDSILDAKRQRYQSYGWTSML 1294


>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
            putative protein [Arabidopsis thaliana]
          Length = 1294

 Score =  115 bits (288), Expect = 4e-24
 Identities = 52/113 (46%), Positives = 77/113 (68%)
 Frame = -1

Query: 364  LPVYAMSCFKIPNNVLHEIAGMIVRFR*NGDDKHQKICWVAWKKMSKPKELGGLGFKELR 185
            +PVYAMSCFK+P N++ EI  +++ F    + K ++I W+AWK++   K+ GGLGF++L 
Sbjct: 1162 MPVYAMSCFKLPLNIVSEIEALLMNFWWEKNAKKREIPWIAWKRLQYSKKEGGLGFRDLA 1221

Query: 184  AFNDTLLAKQLWQLITKPNLLMSTVMKAKYFHSVGILKAKSKPNASWVWKSWM 26
             FND LLAKQ+W++I  PN L + +MKA+YF    IL AK +   S+ W S +
Sbjct: 1222 KFNDALLAKQVWRMINNPNSLFARIMKARYFREDSILDAKRQRYQSYGWTSML 1274


>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/119 (46%), Positives = 76/119 (63%)
 Frame = -1

Query: 364  LPVYAMSCFKIPNNVLHEIAGMIVRFR*NGDDKHQKICWVAWKKMSKPKELGGLGFKELR 185
            +PVYAMSCFK+P  ++ EI  +++ F        + I WVAWK++   K+ GGLGF++L 
Sbjct: 956  MPVYAMSCFKLPKGIVSEIESLLMNFWWEKASNQRGIPWVAWKRLQYSKKEGGLGFRDLA 1015

Query: 184  AFNDTLLAKQLWQLITKPNLLMSTVMKAKYFHSVGILKAKSKPNASWVWKSWMNAKYLM 8
             FND LLAKQ W+LI  PN L + VMKA+YF  V IL AK +   S+ W S ++   L+
Sbjct: 1016 KFNDALLAKQAWRLIQYPNSLFARVMKARYFKDVSILDAKVRKQQSYGWASLLDGIALL 1074


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/119 (46%), Positives = 76/119 (63%)
 Frame = -1

Query: 364  LPVYAMSCFKIPNNVLHEIAGMIVRFR*NGDDKHQKICWVAWKKMSKPKELGGLGFKELR 185
            +PVYAMSCFK+P  ++ EI  +++ F        + I WVAWK++   K+ GGLGF++L 
Sbjct: 1182 MPVYAMSCFKLPKGIVSEIESLLMNFWWEKASNQRGIPWVAWKRLQYSKKEGGLGFRDLA 1241

Query: 184  AFNDTLLAKQLWQLITKPNLLMSTVMKAKYFHSVGILKAKSKPNASWVWKSWMNAKYLM 8
             FND LLAKQ W+LI  PN L + VMKA+YF  V IL AK +   S+ W S ++   L+
Sbjct: 1242 KFNDALLAKQAWRLIQYPNSLFARVMKARYFKDVSILDAKVRKQQSYGWASLLDGIALL 1300


>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
          Length = 851

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/119 (43%), Positives = 76/119 (63%)
 Frame = -1

Query: 364 LPVYAMSCFKIPNNVLHEIAGMIVRFR*NGDDKHQKICWVAWKKMSKPKELGGLGFKELR 185
           +PVYAMSCFK+P  ++ EI  +++ F        + I WVAWK++   K+ GGLGF++L 
Sbjct: 421 MPVYAMSCFKLPQGIVSEIESLLMNFWWEKASNKRGIPWVAWKRLQYSKKEGGLGFRDLA 480

Query: 184 AFNDTLLAKQLWQLITKPNLLMSTVMKAKYFHSVGILKAKSKPNASWVWKSWMNAKYLM 8
            FND LLAKQ W++I  PN L + VMKA+YF    I+ AK++   S+ W S ++   L+
Sbjct: 481 KFNDALLAKQAWRIIQYPNSLFARVMKARYFKDNSIIDAKTRSQQSYGWSSLLSGIALL 539