BLASTX nr result

ID: Cephaelis21_contig00053716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00053716
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326026.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22
ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containi...   101   7e-20
emb|CAN82291.1| hypothetical protein VITISV_021279 [Vitis vinifera]   100   1e-19
ref|NP_191418.2| pentatricopeptide repeat-containing protein [Ar...   100   2e-19
dbj|BAF01499.1| hypothetical protein [Arabidopsis thaliana]           100   2e-19

>ref|XP_002326026.1| predicted protein [Populus trichocarpa] gi|222862901|gb|EEF00408.1|
           predicted protein [Populus trichocarpa]
          Length = 737

 Score =  108 bits (269), Expect = 6e-22
 Identities = 50/71 (70%), Positives = 62/71 (87%)
 Frame = -3

Query: 221 MYGKCGNLESSVKIFDAVTNKNVITWTALISALGLHGYAQEALQKFKEMEAAGFMPDKVA 42
           MYGKCGNLESS KIFD++T +N+ITWTALISALG++G AQEAL++F +ME  G  PDKVA
Sbjct: 589 MYGKCGNLESSAKIFDSMTERNLITWTALISALGINGCAQEALERFNDMEFLGSRPDKVA 648

Query: 41  FIAVISACKIG 9
           FIAV++AC+ G
Sbjct: 649 FIAVLTACRHG 659


>ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g58590-like [Vitis vinifera]
          Length = 921

 Score =  101 bits (251), Expect = 7e-20
 Identities = 46/71 (64%), Positives = 59/71 (83%)
 Frame = -3

Query: 221 MYGKCGNLESSVKIFDAVTNKNVITWTALISALGLHGYAQEALQKFKEMEAAGFMPDKVA 42
           MYGKCG +ESS+KIF+ +  +N+ITWTALISALG++GYA EAL+ F+EME+ GF PD VA
Sbjct: 628 MYGKCGCIESSLKIFNKIIERNIITWTALISALGVNGYANEALKLFREMESLGFKPDGVA 687

Query: 41  FIAVISACKIG 9
            +AV SAC+ G
Sbjct: 688 LVAVFSACRHG 698


>emb|CAN82291.1| hypothetical protein VITISV_021279 [Vitis vinifera]
          Length = 954

 Score =  100 bits (250), Expect = 1e-19
 Identities = 46/71 (64%), Positives = 59/71 (83%)
 Frame = -3

Query: 221 MYGKCGNLESSVKIFDAVTNKNVITWTALISALGLHGYAQEALQKFKEMEAAGFMPDKVA 42
           MYGKCG +ESS+KIF+ +  +N+ITWTALISALG++GYA EAL+ F+EME+ GF PD VA
Sbjct: 628 MYGKCGCIESSLKIFNKIIXRNIITWTALISALGVNGYANEALKLFREMESLGFKPDGVA 687

Query: 41  FIAVISACKIG 9
            +AV SAC+ G
Sbjct: 688 LVAVFSACRHG 698


>ref|NP_191418.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218525906|sp|Q0WN01.2|PP286_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g58590 gi|332646281|gb|AEE79802.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 42/71 (59%), Positives = 58/71 (81%)
 Frame = -3

Query: 221 MYGKCGNLESSVKIFDAVTNKNVITWTALISALGLHGYAQEALQKFKEMEAAGFMPDKVA 42
           MYGKCG++ S +K+F+    KN+ITWTALIS LG+HGY QEAL+KFKE  + GF PD+V+
Sbjct: 590 MYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVS 649

Query: 41  FIAVISACKIG 9
           FI++++AC+ G
Sbjct: 650 FISILTACRHG 660


>dbj|BAF01499.1| hypothetical protein [Arabidopsis thaliana]
          Length = 741

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 42/71 (59%), Positives = 58/71 (81%)
 Frame = -3

Query: 221 MYGKCGNLESSVKIFDAVTNKNVITWTALISALGLHGYAQEALQKFKEMEAAGFMPDKVA 42
           MYGKCG++ S +K+F+    KN+ITWTALIS LG+HGY QEAL+KFKE  + GF PD+V+
Sbjct: 590 MYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVS 649

Query: 41  FIAVISACKIG 9
           FI++++AC+ G
Sbjct: 650 FISILTACRHG 660


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