BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00053711
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY99339.1| pol-polyprotein [Silene latifolia]                      70   2e-10
dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]                 62   5e-08
ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulga...    62   5e-08
gb|AAM08503.1|AC068654_5 Putative retroelement [Oryza sativa Jap...    57   2e-06
gb|AAO23092.1| putative polyprotein [Oryza sativa Japonica Group...    56   3e-06

>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 43/100 (43%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
 Frame = -3

Query: 300  REDALSKLASSVFS*LNRKVLVEVLQGRSIDSPPQPVLTIEEVGNSWMSPIFLY-LTEGI 124
            R D LSKL SS    ++R VLV++   +SI      V  IE    +WM+PI  Y LT+G 
Sbjct: 852  RADTLSKLTSSTIKNVSRTVLVDIRNAKSITETVGMVGDIE-AETTWMTPIMKYKLTKG- 909

Query: 123  LPQDKSEAHRLALRSAYYVVQDDILYRRSYLQPLQRCVGP 4
            LP+D+S + ++   +A Y+V +  LYRRS ++PL +CVGP
Sbjct: 910  LPEDRSLSQKIKRIAARYLVFEGELYRRSVIRPLLKCVGP 949


>dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]
          Length = 764

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 38/94 (40%), Positives = 50/94 (53%)
 Frame = -3

Query: 294 DALSKLASSVFS*LNRKVLVEVLQGRSIDSPPQPVLTIEEVGNSWMSPIFLYLTEGILPQ 115
           DALSKLASS    LNR V+VEV++ RSID   +  +        W   I  Y   G LP 
Sbjct: 312 DALSKLASSTLQDLNRTVMVEVMEQRSIDKAER--INCVTAQKEWYDDIQEYKLTGKLPD 369

Query: 114 DKSEAHRLALRSAYYVVQDDILYRRSYLQPLQRC 13
           D++ A  +   S +Y++    LY+RS   PL RC
Sbjct: 370 DQTIAKAVKRDSHWYIIYQGQLYKRSDSYPLLRC 403


>ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|323435157|ref|YP_004222375.1| hypothetical protein
           BevumaM_p142 [Beta vulgaris subsp. maritima]
           gi|346683249|ref|YP_004842181.1| hypothetical protein
           BemaM_p137 [Beta macrocarpa] gi|9049300|dbj|BAA99310.1|
           orf764 [Beta vulgaris subsp. vulgaris]
           gi|317905608|emb|CBJ14014.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439890|emb|CBJ17590.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148045|emb|CBJ20708.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500167|emb|CBX24986.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977907|emb|CBL54131.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 764

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 38/94 (40%), Positives = 50/94 (53%)
 Frame = -3

Query: 294 DALSKLASSVFS*LNRKVLVEVLQGRSIDSPPQPVLTIEEVGNSWMSPIFLYLTEGILPQ 115
           DALSKLASS    LNR V+VEV++ RSID   +  +        W   I  Y   G LP 
Sbjct: 312 DALSKLASSTLQDLNRTVMVEVMEQRSIDKAER--INCVTAQKEWYDDIQEYKLTGKLPD 369

Query: 114 DKSEAHRLALRSAYYVVQDDILYRRSYLQPLQRC 13
           D++ A  +   S +Y++    LY+RS   PL RC
Sbjct: 370 DQTIAKAVKRDSHWYIIYQGQLYKRSDSYPLLRC 403


>gb|AAM08503.1|AC068654_5 Putative retroelement [Oryza sativa Japonica Group]
            gi|31429806|gb|AAP51808.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1047

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
 Frame = -3

Query: 243  VLVEVLQGRSIDSPPQPVLTIE--EVGNS---WMSPIFLYLTEGILPQDKSEAHRLALRS 79
            +  EVL   S+      V+ I+  E+GN    W +P   YL  G LP+D++EA RL LR+
Sbjct: 900  IFFEVLYAPSVPIESLEVMAIDQAELGNDPEDWRTPFVKYLDCGWLPEDEAEAKRLQLRA 959

Query: 78   AYYVVQDDILYRRSYLQPLQRCV 10
            A Y +    LYR   LQPL RC+
Sbjct: 960  AKYKMVSGQLYRSGVLQPLLRCI 982


>gb|AAO23092.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108709049|gb|ABF96844.1| retrotransposon protein,
           putative, Ty3-gypsy subclass [Oryza sativa Japonica
           Group]
          Length = 658

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
 Frame = -3

Query: 243 VLVEVLQGRSIDSPPQPVLTIEEVG-----NSWMSPIFLYLTEGILPQDKSEAHRLALRS 79
           +  EVL   S+      VL I++V      N W +P   YL  G LP D++EA RL +R+
Sbjct: 221 IFFEVLHTPSLPVDSLTVLAIDQVKLGEDPNDWRTPFVKYLEAGWLPDDEAEAKRLQIRA 280

Query: 78  AYYVVQDDILYRRSYLQPLQRCV 10
             Y +    LYR   LQPL RC+
Sbjct: 281 TKYKLVSGQLYRSGTLQPLLRCI 303