BLASTX nr result

ID: Cephaelis21_contig00053668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00053668
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-18
ref|XP_004145982.1| PREDICTED: pentatricopeptide repeat-containi...    95   5e-18
ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containi...    94   9e-18
emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]    94   9e-18
ref|XP_002513583.1| pentatricopeptide repeat-containing protein,...    92   6e-17

>ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Cucumis sativus]
          Length = 710

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 45/78 (57%), Positives = 58/78 (74%)
 Frame = +3

Query: 3   LMIKGYALHDRLEDSKNLFLEMSDRSLVCLNTMIHVLSKSGEVHKALEIFEEIKGEGSPV 182
           LM+KGYA   R+E SK LF  M+ ++   LNTMI V S++GE+ KA ++FE +K EG PV
Sbjct: 339 LMLKGYATSGRIEGSKRLFERMTHKTTSSLNTMISVYSRNGEIDKAFKLFESVKSEGDPV 398

Query: 183 TWNSMISGFIENGQHESA 236
           TWNSMISG+I+N QHE A
Sbjct: 399 TWNSMISGYIQNHQHEGA 416


>ref|XP_004145982.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Cucumis sativus]
          Length = 710

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 45/78 (57%), Positives = 57/78 (73%)
 Frame = +3

Query: 3   LMIKGYALHDRLEDSKNLFLEMSDRSLVCLNTMIHVLSKSGEVHKALEIFEEIKGEGSPV 182
           LM+KGYA   R+E SK LF  M+ ++   LNTMI V S++GE+ KA ++FE +K EG PV
Sbjct: 339 LMLKGYATSGRIEGSKRLFERMTHKTTSSLNTMISVYSRNGEIDKAFKLFESVKSEGDPV 398

Query: 183 TWNSMISGFIENGQHESA 236
           TWNSMISG I+N QHE A
Sbjct: 399 TWNSMISGCIQNHQHEGA 416


>ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
           gi|302143682|emb|CBI22543.3| unnamed protein product
           [Vitis vinifera]
          Length = 728

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 46/78 (58%), Positives = 59/78 (75%)
 Frame = +3

Query: 3   LMIKGYALHDRLEDSKNLFLEMSDRSLVCLNTMIHVLSKSGEVHKALEIFEEIKGEGSPV 182
           LMIKGYA+  +++DSK LF +M  R++   NTMI V S++GE+ KALE+FEE K E  PV
Sbjct: 334 LMIKGYAVGGQMDDSKRLFEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPV 393

Query: 183 TWNSMISGFIENGQHESA 236
           TWNSMISG+I +GQ E A
Sbjct: 394 TWNSMISGYIHSGQPEEA 411


>emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
          Length = 768

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 46/78 (58%), Positives = 59/78 (75%)
 Frame = +3

Query: 3   LMIKGYALHDRLEDSKNLFLEMSDRSLVCLNTMIHVLSKSGEVHKALEIFEEIKGEGSPV 182
           LMIKGYA+  +++DSK LF +M  R++   NTMI V S++GE+ KALE+FEE K E  PV
Sbjct: 374 LMIKGYAVGGQMDDSKRLFEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPV 433

Query: 183 TWNSMISGFIENGQHESA 236
           TWNSMISG+I +GQ E A
Sbjct: 434 TWNSMISGYIHSGQPEEA 451


>ref|XP_002513583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547491|gb|EEF48986.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 567

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 40/78 (51%), Positives = 60/78 (76%)
 Frame = +3

Query: 3   LMIKGYALHDRLEDSKNLFLEMSDRSLVCLNTMIHVLSKSGEVHKALEIFEEIKGEGSPV 182
           LM+K Y++  R+EDSK LF +M  ++++  NTMI V S++GE+ KAL +FE+ K + +PV
Sbjct: 337 LMVKAYSMSGRVEDSKTLFEKMPQKTIISSNTMISVYSRNGELDKALMLFEQTKDQRNPV 396

Query: 183 TWNSMISGFIENGQHESA 236
           TWNSM+SG+++N QHE A
Sbjct: 397 TWNSMLSGYVQNEQHEEA 414


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