BLASTX nr result

ID: Cephaelis21_contig00053581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00053581
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524786.1| conserved hypothetical protein [Ricinus comm...    74   1e-11
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210...    72   6e-11
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ...    69   3e-10
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...    69   5e-10
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript...    69   5e-10

>ref|XP_002524786.1| conserved hypothetical protein [Ricinus communis]
           gi|223535970|gb|EEF37629.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 105

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/62 (58%), Positives = 44/62 (70%)
 Frame = -3

Query: 215 RKAISEALGFQQVEDLGIYLGVPLLHKRITKNTYKFIVDKICHKLEGWPAKQLSFAGRIT 36
           R+ ++  LG++   DLG YLG+P+LH RI KNTY+ IVDKI  KL GW    LS AGRIT
Sbjct: 44  RRILASKLGYEMTSDLGKYLGMPILHGRINKNTYQGIVDKIGSKLAGWSNSCLSLAGRIT 103

Query: 35  LA 30
           LA
Sbjct: 104 LA 105


>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
           putative protein [Arabidopsis thaliana]
          Length = 947

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/69 (46%), Positives = 48/69 (69%)
 Frame = -3

Query: 212 KAISEALGFQQVEDLGIYLGVPLLHKRITKNTYKFIVDKICHKLEGWPAKQLSFAGRITL 33
           K IS+  G +   +LG YLG+P+L +RI K+T+  +++++  +L GW  + LSFAGR+TL
Sbjct: 410 KLISKESGIKSTRELGKYLGMPILQRRINKDTFGEVLERVSSRLAGWKGRSLSFAGRLTL 469

Query: 32  AKSVLLAIP 6
            KSVL  IP
Sbjct: 470 TKSVLSLIP 478


>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
          Length = 799

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/69 (47%), Positives = 48/69 (69%)
 Frame = -3

Query: 212 KAISEALGFQQVEDLGIYLGVPLLHKRITKNTYKFIVDKICHKLEGWPAKQLSFAGRITL 33
           K IS+  G +  ++LG YLG+P+L KRI K+T+  I+ ++  +L GW  + LS AGR+TL
Sbjct: 188 KFISDESGIKSTKELGKYLGMPVLQKRINKDTFGEILLRVSSRLAGWKGRMLSLAGRLTL 247

Query: 32  AKSVLLAIP 6
            KSVL +IP
Sbjct: 248 TKSVLSSIP 256


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268307|emb|CAB78601.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 929

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/67 (44%), Positives = 47/67 (70%)
 Frame = -3

Query: 206 ISEALGFQQVEDLGIYLGVPLLHKRITKNTYKFIVDKICHKLEGWPAKQLSFAGRITLAK 27
           I+   G     +LG YLG+P+L KRI K+T+  +++++  +L GW ++ LS AGRITL K
Sbjct: 533 ITAETGIGSTRELGKYLGMPVLQKRINKDTFGEVLERVSSRLSGWKSRSLSLAGRITLTK 592

Query: 26  SVLLAIP 6
           +VL++IP
Sbjct: 593 AVLMSIP 599


>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 732

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/69 (46%), Positives = 47/69 (68%)
 Frame = -3

Query: 212 KAISEALGFQQVEDLGIYLGVPLLHKRITKNTYKFIVDKICHKLEGWPAKQLSFAGRITL 33
           K IS+  G     +LG YLG+P+L +RI K+T+  I++K+  +L GW  + LS AGR+TL
Sbjct: 258 KLISDESGISSTRELGKYLGMPVLQRRINKDTFGDILEKLTTRLAGWKGRFLSLAGRVTL 317

Query: 32  AKSVLLAIP 6
            K+VL +IP
Sbjct: 318 TKAVLSSIP 326


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