BLASTX nr result

ID: Cephaelis21_contig00053418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00053418
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611337.1| DNA mismatch repair protein mutS [Medicago t...    61   8e-08
ref|XP_003538746.1| PREDICTED: mutS protein homolog 4-like [Glyc...    60   2e-07
ref|XP_002326462.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002262998.2| PREDICTED: mutS protein homolog 4-like, part...    60   2e-07
emb|CBI37367.3| unnamed protein product [Vitis vinifera]               60   2e-07

>ref|XP_003611337.1| DNA mismatch repair protein mutS [Medicago truncatula]
           gi|355512672|gb|AES94295.1| DNA mismatch repair protein
           mutS [Medicago truncatula]
          Length = 800

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = +3

Query: 132 SVQNLEIIEPMQSTLYGTNSKKRSLFQMLKTTKIVGGY 245
           SVQNLEIIEP  S L GT++KKRSLF MLKTTK +GGY
Sbjct: 178 SVQNLEIIEPFHSALLGTSNKKRSLFHMLKTTKTIGGY 215


>ref|XP_003538746.1| PREDICTED: mutS protein homolog 4-like [Glycine max]
          Length = 794

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = +3

Query: 132 SVQNLEIIEPMQSTLYGTNSKKRSLFQMLKTTKIVGG 242
           S+QNLEIIEP  STL GT++KKRSLF MLKTTK +GG
Sbjct: 171 SIQNLEIIEPFHSTLLGTSNKKRSLFHMLKTTKTIGG 207


>ref|XP_002326462.1| predicted protein [Populus trichocarpa] gi|222833784|gb|EEE72261.1|
           predicted protein [Populus trichocarpa]
          Length = 700

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/37 (81%), Positives = 30/37 (81%)
 Frame = +3

Query: 132 SVQNLEIIEPMQSTLYGTNSKKRSLFQMLKTTKIVGG 242
           SVQNLEIIEP  STL GT SKKRSLF MLKTTK  GG
Sbjct: 171 SVQNLEIIEPFHSTLLGTTSKKRSLFHMLKTTKTTGG 207


>ref|XP_002262998.2| PREDICTED: mutS protein homolog 4-like, partial [Vitis vinifera]
          Length = 456

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/37 (75%), Positives = 33/37 (89%)
 Frame = +3

Query: 132 SVQNLEIIEPMQSTLYGTNSKKRSLFQMLKTTKIVGG 242
           SVQNLEIIEP+ S+L+GT++KKRSLF MLKTTK  GG
Sbjct: 183 SVQNLEIIEPLHSSLWGTSNKKRSLFHMLKTTKTTGG 219


>emb|CBI37367.3| unnamed protein product [Vitis vinifera]
          Length = 280

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/37 (75%), Positives = 33/37 (89%)
 Frame = +3

Query: 132 SVQNLEIIEPMQSTLYGTNSKKRSLFQMLKTTKIVGG 242
           SVQNLEIIEP+ S+L+GT++KKRSLF MLKTTK  GG
Sbjct: 7   SVQNLEIIEPLHSSLWGTSNKKRSLFHMLKTTKTTGG 43


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