BLASTX nr result

ID: Cephaelis21_contig00053370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00053370
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   164   9e-39
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   164   9e-39
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]         164   9e-39
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   164   9e-39
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   162   3e-38

>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  164 bits (414), Expect = 9e-39
 Identities = 76/118 (64%), Positives = 92/118 (77%)
 Frame = -3

Query: 356  YGLKQAPRAWYTRIDTFFVARGFQRCPYEHTLYVKVSTNEDITIVCLYVDDLIFTGNNEE 177
            YGLKQAPRAW TRID +F  + F +CPYEH LY+K+   EDI I CLYVDDLIFTGNN  
Sbjct: 985  YGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQ-KEDILIACLYVDDLIFTGNNPS 1043

Query: 176  MLAEFREAMIKQFEMTDLGFMSYFLGIEVHQSDSGIFIFQKKFAGDILKKFKMDGAKP 3
            M  EF++ M K+FEMTD+G MSY+LGIEV Q D+GIFI Q+ +A ++LKKFKMD + P
Sbjct: 1044 MFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNP 1101


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  164 bits (414), Expect = 9e-39
 Identities = 76/118 (64%), Positives = 92/118 (77%)
 Frame = -3

Query: 356  YGLKQAPRAWYTRIDTFFVARGFQRCPYEHTLYVKVSTNEDITIVCLYVDDLIFTGNNEE 177
            YGLKQAPRAW TRID +F  + F +CPYEH LY+K+   EDI I CLYVDDLIFTGNN  
Sbjct: 953  YGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQ-KEDILIACLYVDDLIFTGNNPS 1011

Query: 176  MLAEFREAMIKQFEMTDLGFMSYFLGIEVHQSDSGIFIFQKKFAGDILKKFKMDGAKP 3
            M  EF++ M K+FEMTD+G MSY+LGIEV Q D+GIFI Q+ +A ++LKKFKMD + P
Sbjct: 1012 MFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNP 1069


>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 623

 Score =  164 bits (414), Expect = 9e-39
 Identities = 76/118 (64%), Positives = 92/118 (77%)
 Frame = -3

Query: 356 YGLKQAPRAWYTRIDTFFVARGFQRCPYEHTLYVKVSTNEDITIVCLYVDDLIFTGNNEE 177
           YGLKQAPRAW TRID +F  + F +CPYEH LY+K+   EDI I CLYVDDLIFTGNN  
Sbjct: 482 YGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQ-KEDILIACLYVDDLIFTGNNPS 540

Query: 176 MLAEFREAMIKQFEMTDLGFMSYFLGIEVHQSDSGIFIFQKKFAGDILKKFKMDGAKP 3
           M  EF++ M K+FEMTD+G MSY+LGIEV Q D+GIFI Q+ +A ++LKKFKMD + P
Sbjct: 541 MFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNP 598


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  164 bits (414), Expect = 9e-39
 Identities = 76/118 (64%), Positives = 92/118 (77%)
 Frame = -3

Query: 356  YGLKQAPRAWYTRIDTFFVARGFQRCPYEHTLYVKVSTNEDITIVCLYVDDLIFTGNNEE 177
            YGLKQAPRAW TRID +F  + F +CPYEH LY+K+   EDI I CLYVDDLIFTGNN  
Sbjct: 985  YGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQ-KEDILIACLYVDDLIFTGNNPS 1043

Query: 176  MLAEFREAMIKQFEMTDLGFMSYFLGIEVHQSDSGIFIFQKKFAGDILKKFKMDGAKP 3
            M  EF++ M K+FEMTD+G MSY+LGIEV Q D+GIFI Q+ +A ++LKKFKMD + P
Sbjct: 1044 MFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNP 1101


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  162 bits (410), Expect = 3e-38
 Identities = 75/118 (63%), Positives = 92/118 (77%)
 Frame = -3

Query: 356  YGLKQAPRAWYTRIDTFFVARGFQRCPYEHTLYVKVSTNEDITIVCLYVDDLIFTGNNEE 177
            YGLKQAPRAW TRID +F  + F +CPYEH LY+K+   EDI I CLYVDDLIFTGNN  
Sbjct: 985  YGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQ-KEDILIACLYVDDLIFTGNNPS 1043

Query: 176  MLAEFREAMIKQFEMTDLGFMSYFLGIEVHQSDSGIFIFQKKFAGDILKKFKMDGAKP 3
            +  EF++ M K+FEMTD+G MSY+LGIEV Q D+GIFI Q+ +A ++LKKFKMD + P
Sbjct: 1044 IFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNP 1101


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