BLASTX nr result

ID: Cephaelis21_contig00053270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00053270
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279503.1| PREDICTED: probable ATP-dependent RNA helica...   145   3e-33
emb|CAN73493.1| hypothetical protein VITISV_017477 [Vitis vinifera]   145   3e-33
ref|XP_002299703.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-29
emb|CBI36138.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_004159020.1| PREDICTED: probable ATP-dependent RNA helica...   127   1e-27

>ref|XP_002279503.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Vitis
            vinifera]
          Length = 961

 Score =  145 bits (367), Expect = 3e-33
 Identities = 72/108 (66%), Positives = 88/108 (81%)
 Frame = -1

Query: 326  VELVLEDYKETIDKSMSKDAKHDPASFSGAVLLAVVGGKMSEGINFSDGMGRCIVMVGLP 147
            VE VL++YKE IDKS  ++ K DP   +GA+LLAVVGGK+SEGINFSDGMGRCIVMVGLP
Sbjct: 760  VEFVLKEYKEAIDKSSDRNQKEDPVPQNGAILLAVVGGKISEGINFSDGMGRCIVMVGLP 819

Query: 146  YPSPSDIELMERVKYIEGLDSTSTSKSNEPVGSSECSNGNIQAGFDIL 3
            YPSPSDIEL+ERVKYIEGL  + +S+S +    +E  +G++Q GFDIL
Sbjct: 820  YPSPSDIELLERVKYIEGLGVSISSRSTKFSVGNEYFSGDVQVGFDIL 867


>emb|CAN73493.1| hypothetical protein VITISV_017477 [Vitis vinifera]
          Length = 914

 Score =  145 bits (367), Expect = 3e-33
 Identities = 72/108 (66%), Positives = 88/108 (81%)
 Frame = -1

Query: 326  VELVLEDYKETIDKSMSKDAKHDPASFSGAVLLAVVGGKMSEGINFSDGMGRCIVMVGLP 147
            VE VL++YKE IDKS  ++ K DP   +GA+LLAVVGGK+SEGINFSDGMGRCIVMVGLP
Sbjct: 713  VEFVLKEYKEAIDKSSDRNQKEDPVPQNGAILLAVVGGKISEGINFSDGMGRCIVMVGLP 772

Query: 146  YPSPSDIELMERVKYIEGLDSTSTSKSNEPVGSSECSNGNIQAGFDIL 3
            YPSPSDIEL+ERVKYIEGL  + +S+S +    +E  +G++Q GFDIL
Sbjct: 773  YPSPSDIELLERVKYIEGLGVSISSRSTKFSVGNEYYSGDVQVGFDIL 820


>ref|XP_002299703.1| predicted protein [Populus trichocarpa] gi|222846961|gb|EEE84508.1|
            predicted protein [Populus trichocarpa]
          Length = 918

 Score =  132 bits (331), Expect = 4e-29
 Identities = 69/108 (63%), Positives = 79/108 (73%)
 Frame = -1

Query: 326  VELVLEDYKETIDKSMSKDAKHDPASFSGAVLLAVVGGKMSEGINFSDGMGRCIVMVGLP 147
            VEL+L++YKETID  +S   K D    +GAVLLAVVGGK+SEGINFSDGMGRCIVMVGLP
Sbjct: 718  VELILKEYKETID-GLSSGTKEDGVRHNGAVLLAVVGGKISEGINFSDGMGRCIVMVGLP 776

Query: 146  YPSPSDIELMERVKYIEGLDSTSTSKSNEPVGSSECSNGNIQAGFDIL 3
            YPSPSD+ELMERVKYIE L   +  K  E        NG++Q  F IL
Sbjct: 777  YPSPSDMELMERVKYIESLGEPNCGKRPEISVGEHYYNGDVQTAFSIL 824


>emb|CBI36138.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  129 bits (324), Expect = 2e-28
 Identities = 62/79 (78%), Positives = 70/79 (88%)
 Frame = -1

Query: 326 VELVLEDYKETIDKSMSKDAKHDPASFSGAVLLAVVGGKMSEGINFSDGMGRCIVMVGLP 147
           VE VL++YKE IDKS  ++ K DP   +GA+LLAVVGGK+SEGINFSDGMGRCIVMVGLP
Sbjct: 657 VEFVLKEYKEAIDKSSDRNQKEDPVPQNGAILLAVVGGKISEGINFSDGMGRCIVMVGLP 716

Query: 146 YPSPSDIELMERVKYIEGL 90
           YPSPSDIEL+ERVKYIEGL
Sbjct: 717 YPSPSDIELLERVKYIEGL 735


>ref|XP_004159020.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Cucumis
            sativus]
          Length = 1168

 Score =  127 bits (318), Expect = 1e-27
 Identities = 66/108 (61%), Positives = 84/108 (77%)
 Frame = -1

Query: 326  VELVLEDYKETIDKSMSKDAKHDPASFSGAVLLAVVGGKMSEGINFSDGMGRCIVMVGLP 147
            VE VL++YKE ID    KD K +  S SGAVL AVVGGK+SEGIN SDGMGRCIVMVGLP
Sbjct: 703  VESVLKEYKENIDALSKKDPKQNILSTSGAVLFAVVGGKISEGINLSDGMGRCIVMVGLP 762

Query: 146  YPSPSDIELMERVKYIEGLDSTSTSKSNEPVGSSECSNGNIQAGFDIL 3
            YPSPSDIELMERVK+IE L ++++ KS++    ++  +G+++ G +IL
Sbjct: 763  YPSPSDIELMERVKHIENLGNSNSIKSSK--FYNDVPSGDVETGLEIL 808


Top