BLASTX nr result

ID: Cephaelis21_contig00053262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00053262
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37517.3| unnamed protein product [Vitis vinifera]              239   1e-61
ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ...   239   1e-61
ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric...   233   1e-59
tpg|DAA43538.1| TPA: hypothetical protein ZEAMMB73_751776 [Zea m...   232   2e-59
ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arab...   232   3e-59

>emb|CBI37517.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  239 bits (611), Expect = 1e-61
 Identities = 117/141 (82%), Positives = 126/141 (89%), Gaps = 1/141 (0%)
 Frame = -3

Query: 421 FGQQFTPTTLKLDSGVTRPPPLLTEADLLTCMDKAGIGTDATMHDHIKKLLDRFYATKE- 245
           FGQQF PTTL LDSGVTRPPPLL+EADLL CMDKAGIGTDATMHDHIKKLLDRFYATK+ 
Sbjct: 149 FGQQFIPTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRFYATKDS 208

Query: 244 NAYFIPTNLGQALVMGYDDMGYELWKPYLRARMESDMKEVSIGTKRRAQVLETCLQQMKA 65
           N  F PTNLG+ALVMGYDDMGYELWKPYLR+ ME DMK VSIGTKRR +VL TCL+QMKA
Sbjct: 209 NTRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTTCLEQMKA 268

Query: 64  CFIDARVKKDKLFEAMAIFFE 2
           CF+DAR+ K KL EAMA+FFE
Sbjct: 269 CFLDARLNKVKLLEAMALFFE 289


>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
          Length = 914

 Score =  239 bits (611), Expect = 1e-61
 Identities = 117/141 (82%), Positives = 126/141 (89%), Gaps = 1/141 (0%)
 Frame = -3

Query: 421 FGQQFTPTTLKLDSGVTRPPPLLTEADLLTCMDKAGIGTDATMHDHIKKLLDRFYATKE- 245
           FGQQF PTTL LDSGVTRPPPLL+EADLL CMDKAGIGTDATMHDHIKKLLDRFYATK+ 
Sbjct: 474 FGQQFIPTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRFYATKDS 533

Query: 244 NAYFIPTNLGQALVMGYDDMGYELWKPYLRARMESDMKEVSIGTKRRAQVLETCLQQMKA 65
           N  F PTNLG+ALVMGYDDMGYELWKPYLR+ ME DMK VSIGTKRR +VL TCL+QMKA
Sbjct: 534 NTRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTTCLEQMKA 593

Query: 64  CFIDARVKKDKLFEAMAIFFE 2
           CF+DAR+ K KL EAMA+FFE
Sbjct: 594 CFLDARLNKVKLLEAMALFFE 614


>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
           gi|223533243|gb|EEF34998.1| prokaryotic DNA
           topoisomerase, putative [Ricinus communis]
          Length = 833

 Score =  233 bits (594), Expect = 1e-59
 Identities = 113/140 (80%), Positives = 125/140 (89%), Gaps = 1/140 (0%)
 Frame = -3

Query: 418 GQQFTPTTLKLDSGVTRPPPLLTEADLLTCMDKAGIGTDATMHDHIKKLLDRFYATKE-N 242
           GQQF PTTL LDSGVTRPPPLL+E+DLL+CMDKAGIGTDATMHDHIKKLLDRFYATK+ N
Sbjct: 478 GQQFMPTTLTLDSGVTRPPPLLSESDLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDAN 537

Query: 241 AYFIPTNLGQALVMGYDDMGYELWKPYLRARMESDMKEVSIGTKRRAQVLETCLQQMKAC 62
             F PTNLG+ALVMGYDDMGYELWKP LR+ ME DMKEVS+G K +A+VLETCLQQMK C
Sbjct: 538 TRFSPTNLGEALVMGYDDMGYELWKPNLRSMMEYDMKEVSMGHKSKAEVLETCLQQMKTC 597

Query: 61  FIDARVKKDKLFEAMAIFFE 2
           F+DAR+ K KL EAMA+FFE
Sbjct: 598 FLDARINKVKLLEAMAVFFE 617


>tpg|DAA43538.1| TPA: hypothetical protein ZEAMMB73_751776 [Zea mays]
          Length = 915

 Score =  232 bits (592), Expect = 2e-59
 Identities = 112/139 (80%), Positives = 124/139 (89%), Gaps = 1/139 (0%)
 Frame = -3

Query: 418 GQQFTPTTLKLDSGVTRPPPLLTEADLLTCMDKAGIGTDATMHDHIKKLLDRFYATK-EN 242
           GQQF PTTL LDSGVTRPPPLL EADLL+CMDKAGIGTDATMHDHIKKLLDR YATK EN
Sbjct: 482 GQQFVPTTLTLDSGVTRPPPLLAEADLLSCMDKAGIGTDATMHDHIKKLLDRCYATKDEN 541

Query: 241 AYFIPTNLGQALVMGYDDMGYELWKPYLRARMESDMKEVSIGTKRRAQVLETCLQQMKAC 62
             F PTNLG+ALVMGYD+MGYELWKPYLR+ ME+DMK VS+GTK +++VLE+CLQQMKAC
Sbjct: 542 TRFSPTNLGEALVMGYDEMGYELWKPYLRSMMEADMKSVSVGTKSKSEVLESCLQQMKAC 601

Query: 61  FIDARVKKDKLFEAMAIFF 5
           F+DARVKK KL +AM  FF
Sbjct: 602 FLDARVKKAKLLDAMGTFF 620


>ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arabidopsis lyrata subsp.
           lyrata] gi|297310711|gb|EFH41135.1| hypothetical protein
           ARALYDRAFT_496584 [Arabidopsis lyrata subsp. lyrata]
          Length = 923

 Score =  232 bits (591), Expect = 3e-59
 Identities = 115/140 (82%), Positives = 122/140 (87%), Gaps = 1/140 (0%)
 Frame = -3

Query: 418 GQQFTPTTLKLDSGVTRPPPLLTEADLLTCMDKAGIGTDATMHDHIKKLLDRFYATKE-N 242
           GQQF PTTL LDS VTRPPPLL EADLL+CMDKAGIGTDATMHDHIKKLLDR YATK+ N
Sbjct: 483 GQQFIPTTLTLDSAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDAN 542

Query: 241 AYFIPTNLGQALVMGYDDMGYELWKPYLRARMESDMKEVSIGTKRRAQVLETCLQQMKAC 62
             F PTNLG+ALVMGYDDMGYELWKP LRA ME DM EVS+G K +A+VLETCLQQMKAC
Sbjct: 543 TRFSPTNLGEALVMGYDDMGYELWKPNLRALMERDMNEVSVGRKTKAEVLETCLQQMKAC 602

Query: 61  FIDARVKKDKLFEAMAIFFE 2
           F+DARVKK KL EAM IFFE
Sbjct: 603 FLDARVKKSKLLEAMTIFFE 622


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