BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00053254
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...   134   1e-29
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...   131   5e-29
gb|AAC26674.1| putative non-LTR retroelement reverse transcripta...   129   3e-28
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript...   128   5e-28
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...   128   5e-28

>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268307|emb|CAB78601.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 929

 Score =  134 bits (336), Expect = 1e-29
 Identities = 60/111 (54%), Positives = 85/111 (76%)
 Frame = +2

Query: 8   PKFLTQFRPISLCPIPYKIVTKIIVNRMRKVINKLVAPNQVSFIPGRNITDNIVIAQEII 187
           P+ +TQFRP+SLC + +KI+TK++V R++ VI+KL+ P Q SFIPGR   DNIV+ QE +
Sbjct: 314 PERITQFRPVSLCNVLFKIITKMMVIRLKNVISKLIGPAQASFIPGRLSFDNIVVVQEAV 373

Query: 188 HSMRIAKGKEQWMAIKVDLEKAYDHLRWEFILDTLQDAGIPDWMNNIIMEC 340
           HSMR  KG++ WM +K+DLEKAYD +RW+F+ +TL+ AG+ +     IMEC
Sbjct: 374 HSMRRKKGRKGWMLLKLDLEKAYDRIRWDFLAETLEAAGLSEGWIKRIMEC 424


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score =  131 bits (330), Expect = 5e-29
 Identities = 57/111 (51%), Positives = 81/111 (72%)
 Frame = +2

Query: 8   PKFLTQFRPISLCPIPYKIVTKIIVNRMRKVINKLVAPNQVSFIPGRNITDNIVIAQEII 187
           P+    FRPI LC I YKIVTK+I+NR++ ++  L++P Q SF+P R ITDN++I QE+ 
Sbjct: 505 PQLAKHFRPIGLCNIVYKIVTKVIINRLKPILPSLISPTQCSFVPNRQITDNVIIVQEMF 564

Query: 188 HSMRIAKGKEQWMAIKVDLEKAYDHLRWEFILDTLQDAGIPDWMNNIIMEC 340
           HSMR  +GK+ +MA+K+D EKAYD LRW FI ++L +  IP  + +I+M C
Sbjct: 565 HSMRNKQGKKGFMAVKIDFEKAYDRLRWTFIRESLMELRIPQHLVDIVMNC 615


>gb|AAC26674.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 970

 Score =  129 bits (323), Expect = 3e-28
 Identities = 59/109 (54%), Positives = 83/109 (76%), Gaps = 1/109 (0%)
 Frame = +2

Query: 8   PKFLTQFRPISLCPIPYKIVTKIIVNRMRKVINKLVAPNQVSFIPGRNITDNIVIAQEII 187
           P+ +TQFRP+SLC + +KI+TK+IVNR++KVI KL+ P Q +FIPGR   DNIV+ QE +
Sbjct: 212 PERITQFRPMSLCNVLFKIITKMIVNRLKKVILKLIGPAQANFIPGRLSIDNIVLVQEAV 271

Query: 188 HSMRIAKGKEQWMAIKVDLEKAYDHLRWEFILDTLQDAGIPD-WMNNII 331
           HSMR  KG++ WM +K+DLEKAYD +RW F+ +TL   G+ + W + I+
Sbjct: 272 HSMRRKKGRKGWMLLKLDLEKAYDRIRWNFLQETLVATGLSEVWTHRIM 320


>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 732

 Score =  128 bits (321), Expect = 5e-28
 Identities = 60/111 (54%), Positives = 82/111 (73%)
 Frame = +2

Query: 8   PKFLTQFRPISLCPIPYKIVTKIIVNRMRKVINKLVAPNQVSFIPGRNITDNIVIAQEII 187
           P+ +TQFRPISLC + +K +TK +V R+++VI+KL+ P Q SFI GR   DNIVI QE +
Sbjct: 59  PERITQFRPISLCNVLFKTITKTLVMRLKRVISKLIRPAQASFISGRLAADNIVIMQEAV 118

Query: 188 HSMRIAKGKEQWMAIKVDLEKAYDHLRWEFILDTLQDAGIPDWMNNIIMEC 340
           HSMR  KG++ WM +K+DLEKAYD +RWEF+ DTL+   +P+     IM+C
Sbjct: 119 HSMRRKKGRKGWMLLKLDLEKAYDRIRWEFLEDTLRAVRLPEKWIVWIMQC 169


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score =  128 bits (321), Expect = 5e-28
 Identities = 57/109 (52%), Positives = 84/109 (77%), Gaps = 1/109 (0%)
 Frame = +2

Query: 8   PKFLTQFRPISLCPIPYKIVTKIIVNRMRKVINKLVAPNQVSFIPGRNITDNIVIAQEII 187
           P+ + QFRP+SLC + +KI+TK++V R++ VI+KL+ P Q SFIPGR   DNIV+ QE +
Sbjct: 362 PERIQQFRPVSLCNVLFKIITKMMVTRLKNVISKLIGPAQASFIPGRLSIDNIVLVQEAV 421

Query: 188 HSMRIAKGKEQWMAIKVDLEKAYDHLRWEFILDTLQDAGIPD-WMNNII 331
           HSMR  KG++ WM +K+DLEKAYD +RW+F+ +TL+ AG+ + W + I+
Sbjct: 422 HSMRRKKGRKGWMLLKLDLEKAYDRVRWDFLQETLEAAGLSEGWTSRIM 470