BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00053236
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFU95601.1| RpoB, partial (chloroplast) [Irvingia malayana]         62   6e-08
ref|XP_003606033.1| DNA-directed RNA polymerase [Medicago trunca...    62   6e-08
gb|AFU95607.1| RpoB, partial (chloroplast) [Microdesmis casearii...    61   8e-08
gb|AFU95582.1| RpoB, partial (chloroplast) [Bhesa sp. CCD-2012]        61   8e-08
ref|YP_778482.1| RNA polymerase beta subunit [Jasminum nudifloru...    61   8e-08

>gb|AFU95601.1| RpoB, partial (chloroplast) [Irvingia malayana]
          Length = 1108

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/38 (81%), Positives = 34/38 (89%)
 Frame = +2

Query: 155 DIKARIWARVSRKQKISILVL*STMSSNLKDILENVWY 268
           D KARIWARVSRKQKISILVL S M SNL++ILENV+Y
Sbjct: 164 DRKARIWARVSRKQKISILVLSSAMGSNLREILENVYY 201


>ref|XP_003606033.1| DNA-directed RNA polymerase [Medicago truncatula]
           gi|355507088|gb|AES88230.1| DNA-directed RNA polymerase
           [Medicago truncatula]
          Length = 1748

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/37 (83%), Positives = 32/37 (86%)
 Frame = +2

Query: 155 DIKARIWARVSRKQKISILVL*STMSSNLKDILENVW 265
           D KARIWARVSRKQKISILVL S M SNL +ILENVW
Sbjct: 168 DRKARIWARVSRKQKISILVLSSAMGSNLSEILENVW 204


>gb|AFU95607.1| RpoB, partial (chloroplast) [Microdesmis caseariifolia]
          Length = 1108

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/38 (84%), Positives = 33/38 (86%)
 Frame = +2

Query: 155 DIKARIWARVSRKQKISILVL*STMSSNLKDILENVWY 268
           D KARIWARVSRKQKISILVL S M SNLK+ILENV Y
Sbjct: 164 DKKARIWARVSRKQKISILVLSSAMGSNLKEILENVCY 201


>gb|AFU95582.1| RpoB, partial (chloroplast) [Bhesa sp. CCD-2012]
          Length = 1074

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/38 (84%), Positives = 33/38 (86%)
 Frame = +2

Query: 155 DIKARIWARVSRKQKISILVL*STMSSNLKDILENVWY 268
           D KARIWARVSRKQKISILVL S M SNLK+ILENV Y
Sbjct: 130 DRKARIWARVSRKQKISILVLSSAMGSNLKEILENVCY 167


>ref|YP_778482.1| RNA polymerase beta subunit [Jasminum nudiflorum]
           gi|122164981|sp|Q06RD9.1|RPOB_JASNU RecName:
           Full=DNA-directed RNA polymerase subunit beta; AltName:
           Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit beta; Short=RNA polymerase subunit beta
           gi|110456215|gb|ABG74620.1| RNA polymerase beta subunit
           [Jasminum nudiflorum]
          Length = 1064

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/38 (81%), Positives = 34/38 (89%)
 Frame = +2

Query: 155 DIKARIWARVSRKQKISILVL*STMSSNLKDILENVWY 268
           D KARIWARVSRKQKISILVL S M SNLK+IL+NV+Y
Sbjct: 163 DRKARIWARVSRKQKISILVLSSAMGSNLKEILDNVFY 200