BLASTX nr result

ID: Cephaelis21_contig00053173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00053173
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25
ref|XP_002511627.1| pentatricopeptide repeat-containing protein,...   110   2e-22
ref|XP_002326829.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
gb|AAC24378.1| Unknown protein [Arabidopsis thaliana]                  96   3e-18
ref|NP_171708.1| pentatricopeptide repeat-containing protein [Ar...    96   3e-18

>ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Vitis vinifera]
          Length = 746

 Score =  119 bits (297), Expect = 3e-25
 Identities = 59/94 (62%), Positives = 73/94 (77%)
 Frame = +1

Query: 1   LAHKTLEMMLKSSHLPRTSIFHRTLAELVTKGCARESYSMVILMIEKKIRHNANIATDTV 180
           LAHK+LE MLKSSHLP T+IFH  LA LV KGCA ES S+V LM+E++IR N +++T TV
Sbjct: 543 LAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTV 602

Query: 181 RMLYKGGLKDKALDIVRCLYKNRYLVNMEELIIF 282
           R+LYK GL+DKA   +  LY+N YLV MEEL+ F
Sbjct: 603 RLLYKSGLQDKAFMTIGLLYENGYLVKMEELVSF 636


>ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548807|gb|EEF50296.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1163

 Score =  110 bits (274), Expect = 2e-22
 Identities = 54/94 (57%), Positives = 70/94 (74%)
 Frame = +1

Query: 1   LAHKTLEMMLKSSHLPRTSIFHRTLAELVTKGCARESYSMVILMIEKKIRHNANIATDTV 180
           +A++TLE M+KSSH+P TS FH  LA L+ KGCA ES   ++LM+E KIR N N++T TV
Sbjct: 534 VAYQTLEKMIKSSHVPETSTFHSILARLLAKGCAHESARFIMLMLEGKIRQNINLSTHTV 593

Query: 181 RMLYKGGLKDKALDIVRCLYKNRYLVNMEELIIF 282
           R+L+  GL+DKA  IV  LY N Y+V+MEELI F
Sbjct: 594 RLLFGSGLRDKAFKIVGLLYANGYVVDMEELIGF 627


>ref|XP_002326829.1| predicted protein [Populus trichocarpa] gi|222835144|gb|EEE73579.1|
           predicted protein [Populus trichocarpa]
          Length = 664

 Score =  109 bits (272), Expect = 3e-22
 Identities = 55/94 (58%), Positives = 72/94 (76%)
 Frame = +1

Query: 1   LAHKTLEMMLKSSHLPRTSIFHRTLAELVTKGCARESYSMVILMIEKKIRHNANIATDTV 180
           LA+KTLE MLKSS+LP+TS+FH  L+EL+    ARES S V+LMI++KIR N N++T T+
Sbjct: 475 LAYKTLERMLKSSYLPKTSVFHSILSELLKNDFARESASFVVLMIDRKIRQNINLSTHTM 534

Query: 181 RMLYKGGLKDKALDIVRCLYKNRYLVNMEELIIF 282
           R+L+  GL+ KA  IV  LY N Y+V+MEELI F
Sbjct: 535 RLLFGSGLRIKAFQIVELLYDNGYMVDMEELIGF 568


>gb|AAC24378.1| Unknown protein [Arabidopsis thaliana]
          Length = 691

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/92 (52%), Positives = 64/92 (69%)
 Frame = +1

Query: 1   LAHKTLEMMLKSSHLPRTSIFHRTLAELVTKGCARESYSMVILMIEKKIRHNANIATDTV 180
           LAH TL+ ML+SS+LP  + FH  LAEL  +  A ES+ +V LM+EK+IR N +++T  V
Sbjct: 498 LAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVV 557

Query: 181 RMLYKGGLKDKALDIVRCLYKNRYLVNMEELI 276
           R+L+    K+KA  IVR LY N YLV MEEL+
Sbjct: 558 RLLFSSAQKEKAFLIVRLLYDNGYLVKMEELL 589


>ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806399|sp|O81908.2|PPR2_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g02060, chloroplastic; Flags: Precursor
           gi|332189251|gb|AEE27372.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/92 (52%), Positives = 64/92 (69%)
 Frame = +1

Query: 1   LAHKTLEMMLKSSHLPRTSIFHRTLAELVTKGCARESYSMVILMIEKKIRHNANIATDTV 180
           LAH TL+ ML+SS+LP  + FH  LAEL  +  A ES+ +V LM+EK+IR N +++T  V
Sbjct: 517 LAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVV 576

Query: 181 RMLYKGGLKDKALDIVRCLYKNRYLVNMEELI 276
           R+L+    K+KA  IVR LY N YLV MEEL+
Sbjct: 577 RLLFSSAQKEKAFLIVRLLYDNGYLVKMEELL 608


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