BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00053166
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634143.1| PREDICTED: pentatricopeptide repeat-containi...   167   1e-39
emb|CBI23556.3| unnamed protein product [Vitis vinifera]              155   2e-36
ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containi...   139   2e-31
ref|XP_002522011.1| pentatricopeptide repeat-containing protein,...   123   1e-26
ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containi...   120   1e-25

>ref|XP_003634143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  167 bits (422), Expect = 1e-39
 Identities = 90/144 (62%), Positives = 106/144 (73%)
 Frame = +3

Query: 3   SPAKLCSPPLGRRTGAPSRQSIPSTHYRNRKPDFESLKDSLIRQNDVGDIKQAFSTLDFM 182
           SPA+   PP   +T  PSRQ+I  +    + P+FE LK+ LIRQ DVG +  AFSTLD M
Sbjct: 8   SPAQPLLPP-SSKTLNPSRQNIIPSSLSLKNPNFEPLKNRLIRQLDVGRLHHAFSTLDLM 66

Query: 183 AQHGLTPDLTSYSILLKSCIRSRNFHLGKLIHSKLLESRLQLDSIVLNSLISLYSKNGDW 362
            Q    PDLT+YSILLKSCIR RNF LGKL+H KL++S L+LDS+VLN+LISLYSK GD 
Sbjct: 67  TQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDT 126

Query: 363 LTARKIFESMGEDRDLVSWSAMIS 434
            TAR IFE MG  RDLVSWSAM+S
Sbjct: 127 ETARLIFEGMGNKRDLVSWSAMVS 150


>emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  155 bits (393), Expect = 2e-36
 Identities = 79/115 (68%), Positives = 91/115 (79%)
 Frame = +3

Query: 90  RKPDFESLKDSLIRQNDVGDIKQAFSTLDFMAQHGLTPDLTSYSILLKSCIRSRNFHLGK 269
           + P+FE LK+ LIRQ DVG +  AFSTLD M Q    PDLT+YSILLKSCIR RNF LGK
Sbjct: 5   KNPNFEPLKNRLIRQLDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGK 64

Query: 270 LIHSKLLESRLQLDSIVLNSLISLYSKNGDWLTARKIFESMGEDRDLVSWSAMIS 434
           L+H KL++S L+LDS+VLN+LISLYSK GD  TAR IFE MG  RDLVSWSAM+S
Sbjct: 65  LVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVS 119


>ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  139 bits (351), Expect = 2e-31
 Identities = 71/101 (70%), Positives = 80/101 (79%)
 Frame = +3

Query: 132 QNDVGDIKQAFSTLDFMAQHGLTPDLTSYSILLKSCIRSRNFHLGKLIHSKLLESRLQLD 311
           Q DVG +  AFSTLD M Q    PDLT+YSILLKSCIR RNF LGKL+H KL++S L+LD
Sbjct: 1   QLDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELD 60

Query: 312 SIVLNSLISLYSKNGDWLTARKIFESMGEDRDLVSWSAMIS 434
           S+VLN+LISLYSK GD  TAR IFE MG  RDLVSWSAM+S
Sbjct: 61  SVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVS 101


>ref|XP_002522011.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538815|gb|EEF40415.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 585

 Score =  123 bits (309), Expect = 1e-26
 Identities = 71/144 (49%), Positives = 88/144 (61%)
 Frame = +3

Query: 3   SPAKLCSPPLGRRTGAPSRQSIPSTHYRNRKPDFESLKDSLIRQNDVGDIKQAFSTLDFM 182
           SPAKL   PL     +  +   P     +   D  SL   LI     G + +A   LD M
Sbjct: 10  SPAKL---PLKPNNQSSRQNQPPPPPPSSAHSDSHSLNTRLINHLKAGHLSKAIIALDVM 66

Query: 183 AQHGLTPDLTSYSILLKSCIRSRNFHLGKLIHSKLLESRLQLDSIVLNSLISLYSKNGDW 362
            Q+   PDL +YS+LLKSCIRS NF  GKL+H+ L +S L+LDS++LNSLISLYSK G+ 
Sbjct: 67  TQNNTHPDLITYSLLLKSCIRSNNFQKGKLVHNCLTQSGLELDSVILNSLISLYSKCGEL 126

Query: 363 LTARKIFESMGEDRDLVSWSAMIS 434
            +A  IF SMG  RDLVSWSA+IS
Sbjct: 127 NSANDIFISMGNKRDLVSWSALIS 150


>ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  120 bits (301), Expect = 1e-25
 Identities = 68/141 (48%), Positives = 88/141 (62%), Gaps = 3/141 (2%)
 Frame = +3

Query: 21  SPPLGRRTGAPSRQSIPSTHYRNRKPDFES---LKDSLIRQNDVGDIKQAFSTLDFMAQH 191
           S PL      P   S PS+  +   P F +   L   LI++ + G + +A STL+ M   
Sbjct: 3   SLPLPTTLKIPFPSSNPSSSLQF--PTFTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQ 60

Query: 192 GLTPDLTSYSILLKSCIRSRNFHLGKLIHSKLLESRLQLDSIVLNSLISLYSKNGDWLTA 371
           G  PDL +YS+ LK CIR+R+F +G L+H KL +S LQLDS+ LNSLISLYSK G W  A
Sbjct: 61  GSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKA 120

Query: 372 RKIFESMGEDRDLVSWSAMIS 434
             IF+ MG  RDL+SWSAM+S
Sbjct: 121 TSIFQLMGSSRDLISWSAMVS 141



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/94 (29%), Positives = 58/94 (61%)
 Frame = +3

Query: 153 KQAFSTLDFMAQHGLTPDLTSYSILLKSCIRSRNFHLGKLIHSKLLESRLQLDSIVLNSL 332
           ++A    + +   G+     +++ LL           G+ IH+++++S L+L+  V N+L
Sbjct: 459 EEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNAL 518

Query: 333 ISLYSKNGDWLTARKIFESMGEDRDLVSWSAMIS 434
           IS+YS+ G+  +A ++FE M EDR+++SW+++I+
Sbjct: 519 ISMYSRCGNIESAFQVFEDM-EDRNVISWTSIIT 551