BLASTX nr result

ID: Cephaelis21_contig00053071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00053071
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB78007.1| putative protein [Arabidopsis thaliana] gi|73210...    75   3e-13
gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]          77   2e-12
ref|XP_002516014.1| conserved hypothetical protein [Ricinus comm...    73   3e-11
gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...    70   1e-10
ref|XP_002515743.1| hypothetical protein RCOM_1551240 [Ricinus c...    70   2e-10

>emb|CAB78007.1| putative protein [Arabidopsis thaliana] gi|7321071|emb|CAB82118.1|
           putative protein [Arabidopsis thaliana]
          Length = 404

 Score = 75.5 bits (184), Expect(2) = 3e-13
 Identities = 29/69 (42%), Positives = 46/69 (66%)
 Frame = -3

Query: 260 LKVILGGPWTIFGHYLIVQPWHINFSPENDDFTSVVAWIRIPGLAIHRYHKKVLQKICSF 81
           L  + GGPW +FG+YL+VQ W  NF P  DD  +   W+R+  + ++ YH+ +L++I   
Sbjct: 77  LAALTGGPWRVFGNYLMVQDWSPNFDPLRDDIVTTPVWVRLTNIPVNYYHRCLLEEIARG 136

Query: 80  IGKLVKIDL 54
           +GKL+K+DL
Sbjct: 137 LGKLLKVDL 145



 Score = 24.3 bits (51), Expect(2) = 3e-13
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 52  NTVTAKRGRFALIAVEL 2
           NT+T  RGRFA + +E+
Sbjct: 146 NTITFGRGRFARVCIEV 162


>gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 1613

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/82 (42%), Positives = 50/82 (60%)
 Frame = -3

Query: 257 KVILGGPWTIFGHYLIVQPWHINFSPENDDFTSVVAWIRIPGLAIHRYHKKVLQKICSFI 78
           KVILGGPW I GHY+ V+PW ++F P    F S + WI++ GL I  Y ++ + +I S I
Sbjct: 144 KVILGGPWLIDGHYVAVKPWDVDFRPCEKSFGSTLVWIQVSGLPIWCYQEQAMLRIASAI 203

Query: 77  GKLVKIDLQHRHCKKGSICINC 12
           G  VK+DL  +  ++G     C
Sbjct: 204 GIPVKVDLATKLAERGKYARAC 225


>ref|XP_002516014.1| conserved hypothetical protein [Ricinus communis]
           gi|223544919|gb|EEF46434.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 753

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 29/68 (42%), Positives = 43/68 (63%)
 Frame = -3

Query: 260 LKVILGGPWTIFGHYLIVQPWHINFSPENDDFTSVVAWIRIPGLAIHRYHKKVLQKICSF 81
           +  +LGGPW +FGHYL VQ W  +F   +   + V+AWI  P + +H YH K+L+   + 
Sbjct: 45  VSALLGGPWVVFGHYLTVQSWAPSFRASSAVLSKVIAWIHFPDMPMHYYHNKILRTNGNI 104

Query: 80  IGKLVKID 57
           +G+ VKID
Sbjct: 105 VGRTVKID 112


>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 855

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 29/83 (34%), Positives = 43/83 (51%)
 Frame = -3

Query: 260 LKVILGGPWTIFGHYLIVQPWHINFSPENDDFTSVVAWIRIPGLAIHRYHKKVLQKICSF 81
           L  + GGPW  FG YL+VQ W   F P  D+ T+   W+R+  + +  YH  +L  I   
Sbjct: 105 LSALTGGPWRAFGSYLLVQAWSPEFDPLRDEITTTPIWVRLMNIPLSLYHTSILMGIAGS 164

Query: 80  IGKLVKIDLQHRHCKKGSICINC 12
           +GK VK+D+   H ++      C
Sbjct: 165 LGKPVKVDMTTLHVERARFARMC 187


>ref|XP_002515743.1| hypothetical protein RCOM_1551240 [Ricinus communis]
           gi|223545180|gb|EEF46690.1| hypothetical protein
           RCOM_1551240 [Ricinus communis]
          Length = 168

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 30/65 (46%), Positives = 44/65 (67%)
 Frame = -3

Query: 251 ILGGPWTIFGHYLIVQPWHINFSPENDDFTSVVAWIRIPGLAIHRYHKKVLQKICSFIGK 72
           +L GP  I GHYL+V+PW   F    +   SV+ WIR+ G+ IH YH+KVL+ I + +GK
Sbjct: 104 LLNGPRMIMGHYLMVRPWSPEFDSAMNHIQSVIIWIRLLGMPIHFYHRKVLKAIGNIVGK 163

Query: 71  LVKID 57
           +++ID
Sbjct: 164 VMRID 168


Top