BLASTX nr result

ID: Cephaelis21_contig00053051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00053051
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79792.1| hypothetical protein VITISV_021866 [Vitis vinifera]    63   3e-08
emb|CAN80960.1| hypothetical protein VITISV_014609 [Vitis vinifera]    62   4e-08
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    61   1e-07
emb|CAN83807.1| hypothetical protein VITISV_026962 [Vitis vinifera]    60   2e-07
ref|XP_003635602.1| PREDICTED: putative ribonuclease H protein A...    60   2e-07

>emb|CAN79792.1| hypothetical protein VITISV_021866 [Vitis vinifera]
          Length = 546

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/96 (37%), Positives = 57/96 (59%)
 Frame = +3

Query: 3   LHCLFLRFGFHPHFVSLVMNNLSSAWFSILLNGVTSGFFKSS*GLKQGDLFSLLVFILLI 182
           L  L    GF   ++S +   + +  FS+L+NG +SGFFKSS GL+QGD  SL +F+ ++
Sbjct: 58  LFWLMEMMGFGAKWISWIQWCIGTVSFSVLINGTSSGFFKSSRGLRQGDPLSLYLFVTVM 117

Query: 183 EALNKGLKKLLQDGSFLLFTLMGDTLVVITDDLLIF 290
           EAL+  LK+  + G+      +  T ++  DD L+F
Sbjct: 118 EALSCLLKRAKEGGNSCKRGGVEITHLLFADDTLVF 153


>emb|CAN80960.1| hypothetical protein VITISV_014609 [Vitis vinifera]
          Length = 753

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/71 (45%), Positives = 48/71 (67%)
 Frame = +3

Query: 21  RFGFHPHFVSLVMNNLSSAWFSILLNGVTSGFFKSS*GLKQGDLFSLLVFILLIEALNKG 200
           + GF   +V  +   +S+A FS+L+NG + GFF+SS GL+QGDLFS  +F++ IE  +  
Sbjct: 569 KMGFGEKWVGWIKWCISTASFSVLVNGTSKGFFQSSRGLRQGDLFSPYLFVIAIEVFSSF 628

Query: 201 LKKLLQDGSFL 233
           LKK + DG F+
Sbjct: 629 LKKAM-DGGFM 638


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
 Frame = +3

Query: 21  RFGFHPHFVSLVMNNLSSAWFSILLNGVTSGFFKSS*GLKQGDLFSLLVFILLIEALNKG 200
           RFGF   FV  ++  L SA  S+L+NG   GFF  S G++QGD  S L+F L+ E L++ 
Sbjct: 607 RFGFDEKFVHWILVILQSARLSVLVNGKAVGFFTCSHGVRQGDPLSPLLFCLVEEVLSRA 666

Query: 201 LKKLLQDGSFLLFT----LMGDTLVVITDDLLIFTRDLQYSFRVL 323
           L     DG  +  +    +   T ++  DD+LIF    + + R L
Sbjct: 667 LSMAATDGQLIPMSYCRGVSFPTHILYADDVLIFCTGTKRNIRRL 711


>emb|CAN83807.1| hypothetical protein VITISV_026962 [Vitis vinifera]
          Length = 806

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 7/97 (7%)
 Frame = +3

Query: 21  RFGFHPHFVSLVMNNLSSAWFSILLNGVTSGFFKSS*GLKQGDLFSLLVFILLIEALNKG 200
           + GF   +V+ +   +SS  FSILLNG   GFF+SS GL+QGD  S  +FI+ +E L+  
Sbjct: 327 KMGFGTKWVNWMRWCISSIRFSILLNGSPXGFFQSSRGLRQGDPLSPFLFIIAMEVLSSI 386

Query: 201 LKKLLQDG---SFLLFTLMGDTLVV----ITDDLLIF 290
           LK+ LQ G    F+     G+ +VV      DD L+F
Sbjct: 387 LKRALQGGYLEGFMAGERGGEGVVVSHLLFVDDTLVF 423


>ref|XP_003635602.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
           [Vitis vinifera]
          Length = 544

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
 Frame = +3

Query: 27  GFHPHFVSLVMNNLSSAWFSILLNGVTSGFFKSS*GLKQGDLFSLLVFILLIEALNKGLK 206
           GF   ++S +   + +  FS+L+NG +SGFFKSS GL+QGD  S  +F++++EAL+  LK
Sbjct: 2   GFGAKWISWIQWCIGTVSFSVLINGTSSGFFKSSRGLRQGDPLSPYLFVIVMEALSCLLK 61

Query: 207 KLLQDGSFLLFTLMGD-------TLVVITDDLLIF 290
           +  + G    + L G        T ++  DD L+F
Sbjct: 62  RAKEGGFLSGWHLSGRGGGGVEITHLLFADDTLVF 96


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