BLASTX nr result

ID: Cephaelis21_contig00052498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00052498
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
emb|CCA66198.1| hypothetical protein [Beta vulgaris subsp. vulga...    57   1e-06
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...    57   2e-06
gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...    56   3e-06
ref|XP_004172984.1| PREDICTED: uncharacterized protein LOC101232...    55   5e-06

>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
           predicted protein [Populus trichocarpa]
          Length = 819

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
 Frame = +2

Query: 20  RKKPFRFLHFWTKHQGFFEVVKEAWHLDFQCCPMYAXXXXXXXXXXXXXTWSFDSIGNIF 199
           +KKPFRF   W  H  F  +VK+ W  + + CPMY               ++     NI 
Sbjct: 618 KKKPFRFFDMWMDHDEFMPLVKKVWDQNSRGCPMYQLCCKLRKLKQELKLFNMAHFSNIS 677

Query: 200 NNLENMENEVQ*LEEAVQTDCSDSNLIALNEAKAKMILASNNVCD--FWRQKAQVKWIED 373
           + + + +N++   ++A+ T   ++ ++ + E       AS    +  F++QKA+++W+  
Sbjct: 678 DRVRDAKNKMDKAQQALHT-AHENPILCMRERDVVHKYASTVRAEESFFKQKARIQWLSL 736

Query: 374 GDSNSKF 394
           GD N+ +
Sbjct: 737 GDQNTSY 743


>emb|CCA66198.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
 Frame = +2

Query: 26  KPFRFLHFWTKHQGFFEVVKEAWHLDFQCCPMYAXXXXXXXXXXXXXTWSFDSIGNIFNN 205
           +PF+F   W  H+G  E+V++AW    +   M               TW+ +S GNI  N
Sbjct: 237 RPFKFQDVWLSHKGCMEIVEKAWIQSKELTLMQKLKKVKLDLK----TWNSESFGNIDAN 292

Query: 206 LENMENEVQ*LE-EAVQTDCSDSNLIALNEAKAKMILASNNVCDFWRQKAQVKWIEDGDS 382
           +   E E+Q  + EA   D     +    +A+ ++         +W Q++++KW++ GD 
Sbjct: 293 ILLREAEIQKWDSEANSRDLEPEEIKTRAQAQLELWEWLKKKEIYWAQQSRIKWLKSGDR 352

Query: 383 NSKF 394
           N+KF
Sbjct: 353 NTKF 356


>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
 Frame = +2

Query: 32  FRFLHFWTKHQGFFEVVKEAWHLDFQCCPMYAXXXXXXXXXXXXXTWSFDSIGNIFNNLE 211
           F+FL  WT H    +++++ W++     P+Y               W+ D  GNI   + 
Sbjct: 5   FKFLKMWTLHDSCQKLIEDCWNVRVLGSPLYVLSSKLK-------VWNKDVFGNILIQVT 57

Query: 212 NMENEVQ*LEEAVQTDCSDSNLIALNE-AKAKMILASNNVCDFWRQKAQVKWIEDGDSNS 388
             E ++  ++  + T   + NL+   + A+  + LA      FW +KA++KW   GD N+
Sbjct: 58  QAEKKLSDIQNHINTSGHNDNLMNAEKIAQTNLDLALQKQETFWVEKAKLKWHVGGDRNT 117

Query: 389 KF 394
           K+
Sbjct: 118 KY 119


>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 855

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/127 (25%), Positives = 66/127 (51%), Gaps = 3/127 (2%)
 Frame = +2

Query: 23   KKPFRFLHFWTKHQGFFEVVKEAWHLDFQCCPMYAXXXXXXXXXXXXXTWSFDSIGNIFN 202
            ++PFRF   W  H GF ++++ +W+ + +     A              W+ +  G++  
Sbjct: 654  RRPFRFEAAWLTHSGFKDLLQASWNTEGETPVALA------ALKSKLKKWNREVFGDVNR 707

Query: 203  NLENMENEVQ*LEEAVQTDCSDSNLIALNEAKAK---MILASNNVCDFWRQKAQVKWIED 373
              E++ NE++ ++E ++ + +D NL++  E   K   ++L    V   W QK++ KW+E 
Sbjct: 708  RKESLMNEIKVVQELLEINQTD-NLLSKEEELIKEFDVVLEQEEV--LWFQKSREKWVEL 764

Query: 374  GDSNSKF 394
            GD N+K+
Sbjct: 765  GDRNTKY 771


>ref|XP_004172984.1| PREDICTED: uncharacterized protein LOC101232673 [Cucumis sativus]
          Length = 335

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/124 (22%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
 Frame = +2

Query: 29  PFRFLHFWTKHQGFFEVVKEAW-HLDFQCCPMYAXXXXXXXXXXXXXTWSFDSIGNIFNN 205
           PFRF + W  H  F + V+  W  LD   CP++              +W+ ++ GNIF+ 
Sbjct: 209 PFRFENAWLDHHLFLKNVENWWGSLDVDDCPIFFFMEKLKGLKAILKSWNKETFGNIFSQ 268

Query: 206 LENMENEVQ*LEEAVQTDC-SDSNLIALNEAKAKMILASNNVCDFWRQKAQVKWIEDGDS 382
            + + +++   +   ++ C ++ N+      +  ++         W QK+++ W+ +G+ 
Sbjct: 269 KQVLIDKINSFDSLEESSCLNEENVKERENCRGALLDLIVKEQKLWIQKSKLHWLREGEE 328

Query: 383 NSKF 394
           NS F
Sbjct: 329 NSSF 332