BLASTX nr result

ID: Cephaelis21_contig00052484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00052484
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...   103   1e-20
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...   102   2e-20
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]             100   1e-19
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]             100   1e-19
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]             100   1e-19

>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score =  103 bits (258), Expect = 1e-20
 Identities = 47/111 (42%), Positives = 69/111 (62%)
 Frame = -3

Query: 341 RITLAKSVLLVVPTYFMQTTAIPVGVCNQIEKVVRNFIWGGSKDKRKIALVKWDTCCQPN 162
           RITL+K V+  +P Y MQ   IP  +C++IEK+ R F+WG S   RK  LV WD CC P 
Sbjct: 219 RITLSKFVISSIPYYHMQYAKIPKTICDEIEKIQRGFVWGDSNQGRKAHLVSWDVCCLPK 278

Query: 161 PNGGLGLRKMQNQNKSLLIKLGIQLLTRKEALWVKVLRSKYRLHEEIPERI 9
            NGGLG ++  + N++ L+K+   L+ + + LW +VL SKY  + ++   I
Sbjct: 279 MNGGLGFKRPHHMNEAFLMKMLWNLIKQPDKLWCRVLYSKYGRNNDLNNNI 329


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268307|emb|CAB78601.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 929

 Score =  102 bits (255), Expect = 2e-20
 Identities = 46/103 (44%), Positives = 70/103 (67%)
 Frame = -3

Query: 341 RITLAKSVLLVVPTYFMQTTAIPVGVCNQIEKVVRNFIWGGSKDKRKIALVKWDTCCQPN 162
           RITL K+VL+ +P + M +  +P  +  Q++KV RNF+WG + +KRK  L+ W   C+P 
Sbjct: 587 RITLTKAVLMSIPIHTMSSILLPASLLEQLDKVSRNFLWGSTVEKRKQHLLSWKKVCRPK 646

Query: 161 PNGGLGLRKMQNQNKSLLIKLGIQLLTRKEALWVKVLRSKYRL 33
             GGLGLR  ++ N++LL K+G +LL  K +LW +VLR KY++
Sbjct: 647 AAGGLGLRASKDMNRALLAKVGWRLLNDKVSLWARVLRRKYKV 689


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/101 (45%), Positives = 63/101 (62%)
 Frame = -3

Query: 341  RITLAKSVLLVVPTYFMQTTAIPVGVCNQIEKVVRNFIWGGSKDKRKIALVKWDTCCQPN 162
            R  L ++ L  VPTY MQ  A+PV  CN+I+K  RNF+WG   + RK+  V W   C+P 
Sbjct: 1325 RRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPR 1384

Query: 161  PNGGLGLRKMQNQNKSLLIKLGIQLLTRKEALWVKVLRSKY 39
              GGLGLR  ++ N++ L K+  Q+ +  + LWVKVLR KY
Sbjct: 1385 NEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKY 1425


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/101 (45%), Positives = 63/101 (62%)
 Frame = -3

Query: 341  RITLAKSVLLVVPTYFMQTTAIPVGVCNQIEKVVRNFIWGGSKDKRKIALVKWDTCCQPN 162
            R  L ++ L  VPTY MQ  A+PV  CN+I+K  RNF+WG   + RK+  V W   C+P 
Sbjct: 793  RRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPR 852

Query: 161  PNGGLGLRKMQNQNKSLLIKLGIQLLTRKEALWVKVLRSKY 39
              GGLGLR  ++ N++ L K+  Q+ +  + LWVKVLR KY
Sbjct: 853  NEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKY 893


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/101 (45%), Positives = 63/101 (62%)
 Frame = -3

Query: 341  RITLAKSVLLVVPTYFMQTTAIPVGVCNQIEKVVRNFIWGGSKDKRKIALVKWDTCCQPN 162
            R  L ++ L  VPTY MQ  A+PV  CN+I+K  RNF+WG   + RK+  V W   C+P 
Sbjct: 793  RRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPR 852

Query: 161  PNGGLGLRKMQNQNKSLLIKLGIQLLTRKEALWVKVLRSKY 39
              GGLGLR  ++ N++ L K+  Q+ +  + LWVKVLR KY
Sbjct: 853  NEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKY 893