BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00052401
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chai...   149   2e-34
gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox...   148   4e-34
gb|AFS41744.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   148   5e-34
gb|AFS41729.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   148   5e-34
gb|AFS41724.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   148   5e-34

>ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chain 1B, chloroplast
           precursor, putative [Ricinus communis]
           gi|223539597|gb|EEF41184.1| Ribulose bisphosphate
           carboxylase small chain 1B, chloroplast precursor,
           putative [Ricinus communis]
          Length = 181

 Score =  149 bits (377), Expect = 2e-34
 Identities = 77/92 (83%), Positives = 82/92 (89%)
 Frame = -2

Query: 281 MASSMISSVAPVTRASPAQANMVAPFTGLKSIASFPVTRKLENDITSVASNGGRVQCMKV 102
           MASSMISS A V+R+SPAQA MVAPFTGLKS ASFPVTRK  NDITS+ASNGGRVQCM+V
Sbjct: 1   MASSMISS-ASVSRSSPAQATMVAPFTGLKSAASFPVTRKANNDITSIASNGGRVQCMQV 59

Query: 101 WPPVNMKKFETLSYLPPLTTEQLAKEVDYLLR 6
           WPP+  KKFETLSYLP LT EQLAKEVDYLLR
Sbjct: 60  WPPLGKKKFETLSYLPDLTDEQLAKEVDYLLR 91


>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Aralia elata]
          Length = 183

 Score =  148 bits (374), Expect = 4e-34
 Identities = 77/95 (81%), Positives = 87/95 (91%), Gaps = 2/95 (2%)
 Frame = -2

Query: 281 MASSMISS--VAPVTRASPAQANMVAPFTGLKSIASFPVTRKLENDITSVASNGGRVQCM 108
           MASS+ISS  VA V+RA+PAQA+MVAPFTGLKS A+FPVTRK+ NDITS+ SNGGRVQCM
Sbjct: 1   MASSVISSASVAAVSRAAPAQASMVAPFTGLKSTAAFPVTRKV-NDITSLPSNGGRVQCM 59

Query: 107 KVWPPVNMKKFETLSYLPPLTTEQLAKEVDYLLRS 3
           KVWPP+ +KKFETLSYLPPLT E+LAKEVDYLLRS
Sbjct: 60  KVWPPLGLKKFETLSYLPPLTNEELAKEVDYLLRS 94


>gb|AFS41744.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           (chloroplast) [Gossypium tomentosum]
          Length = 182

 Score =  148 bits (373), Expect = 5e-34
 Identities = 76/95 (80%), Positives = 83/95 (87%), Gaps = 2/95 (2%)
 Frame = -2

Query: 281 MASSMISS--VAPVTRASPAQANMVAPFTGLKSIASFPVTRKLENDITSVASNGGRVQCM 108
           MASSMISS  +A V R+SPAQANMVAPFTGLKS ++FPVTRK  NDITS+ASNGGRVQCM
Sbjct: 1   MASSMISSATIATVNRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCM 60

Query: 107 KVWPPVNMKKFETLSYLPPLTTEQLAKEVDYLLRS 3
           +VWPP+  KKFETLSYLP LT  QLAKEVDYLLRS
Sbjct: 61  QVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRS 95


>gb|AFS41729.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           (chloroplast) [Gossypium hirsutum]
           gi|406366478|gb|AFS41736.1| ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit (chloroplast)
           [Gossypium barbadense] gi|406366508|gb|AFS41751.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit (chloroplast) [Gossypium mustelinum]
          Length = 182

 Score =  148 bits (373), Expect = 5e-34
 Identities = 76/95 (80%), Positives = 83/95 (87%), Gaps = 2/95 (2%)
 Frame = -2

Query: 281 MASSMISS--VAPVTRASPAQANMVAPFTGLKSIASFPVTRKLENDITSVASNGGRVQCM 108
           MASSMISS  +A V R+SPAQANMVAPFTGLKS ++FPVTRK  NDITS+ASNGGRVQCM
Sbjct: 1   MASSMISSATIATVNRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCM 60

Query: 107 KVWPPVNMKKFETLSYLPPLTTEQLAKEVDYLLRS 3
           +VWPP+  KKFETLSYLP LT  QLAKEVDYLLRS
Sbjct: 61  QVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRS 95


>gb|AFS41724.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           (chloroplast) [Gossypium raimondii]
          Length = 182

 Score =  148 bits (373), Expect = 5e-34
 Identities = 76/95 (80%), Positives = 83/95 (87%), Gaps = 2/95 (2%)
 Frame = -2

Query: 281 MASSMISS--VAPVTRASPAQANMVAPFTGLKSIASFPVTRKLENDITSVASNGGRVQCM 108
           MASSMISS  +A V R+SPAQANMVAPFTGLKS ++FPVTRK  NDITS+ASNGGRVQCM
Sbjct: 1   MASSMISSATIATVNRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCM 60

Query: 107 KVWPPVNMKKFETLSYLPPLTTEQLAKEVDYLLRS 3
           +VWPP+  KKFETLSYLP LT  QLAKEVDYLLRS
Sbjct: 61  QVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRS 95