BLASTX nr result

ID: Cephaelis21_contig00052369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00052369
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529395.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
ref|XP_002527529.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...    65   4e-09
gb|AAP54617.2| retrotransposon protein, putative, unclassified [...    65   4e-09
gb|EEE67582.1| hypothetical protein OsJ_25113 [Oryza sativa Japo...    65   6e-09

>ref|XP_002529395.1| conserved hypothetical protein [Ricinus communis]
           gi|223531143|gb|EEF32991.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 92

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/81 (34%), Positives = 44/81 (54%)
 Frame = +2

Query: 2   PQKKTRLELWNCLKSIAMIEDLPWIVAGDFNAILXXXXXXXXXXXXMAGCKHFKQCIHDT 181
           P+   R  LWN ++SI+     PWI+  DFN+ L            ++ C+ F++C++D 
Sbjct: 11  PRPSVRKILWNTIRSISNTVTDPWILTSDFNSYLSINDKAGGRPASLSKCRDFRECMNDC 70

Query: 182 NMIDLGFKGPNFTWSRGNLFE 244
           N+ DL F GP +TW R  + E
Sbjct: 71  NLEDLSFTGPKYTWERSGVRE 91


>ref|XP_002527529.1| conserved hypothetical protein [Ricinus communis]
           gi|223533079|gb|EEF34838.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 216

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
 Frame = +2

Query: 8   KKTRLELWNCLKSIAMIEDLPWIVAGDFNAILXXXXXXXXXXXXMAGCKHFKQCIHDTNM 187
           +  R + W+ L+S+A I D PWIV GDFN IL                + F++ + D+ +
Sbjct: 10  RNRRKDNWDLLRSLASINDSPWIVMGDFNDILNHREKRGGVAQPNWLVEGFRRAVWDSGL 69

Query: 188 IDLGFKGPNFTWSRGN-----LFERLDRALSN 268
           +DLGF+G  FTW RG      + ERL+R L N
Sbjct: 70  VDLGFQGCPFTWERGRESGLWVQERLNRMLGN 101


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
           Japonica Group]
          Length = 1382

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
 Frame = +2

Query: 2   PQKKTRLELWNCLKSIAMIEDLPWIVAGDFNAILXXXXXXXXXXXXMAGCKHFKQCIHDT 181
           P+++ R   WN L+ +      PW+  GDFN +L                +HF+ C+ D 
Sbjct: 114 PKRELRHFFWNLLRRLHDQWRGPWLCCGDFNEVLCLDEHLGMRERSEPHMQHFRSCLDDC 173

Query: 182 NMIDLGFKGPNFTWS-----RGNLFERLDRALSN 268
            +IDLGF GP FTWS       N   RLDRA++N
Sbjct: 174 GLIDLGFVGPKFTWSNKQDANSNSKVRLDRAVAN 207


>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
           protein OsJ_32156 [Oryza sativa Japonica Group]
          Length = 1339

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
 Frame = +2

Query: 2   PQKKTRLELWNCLKSIAMIEDLPWIVAGDFNAILXXXXXXXXXXXXMAGCKHFKQCIHDT 181
           P+++ R   WN L+ +      PW+  GDFN +L                +HF+ C+ D 
Sbjct: 71  PKRELRHFFWNLLRRLHDQWRGPWLCCGDFNEVLCLDEHLGMRERSEPHMQHFRSCLDDC 130

Query: 182 NMIDLGFKGPNFTWS-----RGNLFERLDRALSN 268
            +IDLGF GP FTWS       N   RLDRA++N
Sbjct: 131 GLIDLGFVGPKFTWSNKQDANSNSKVRLDRAVAN 164


>gb|EEE67582.1| hypothetical protein OsJ_25113 [Oryza sativa Japonica Group]
          Length = 915

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
 Frame = +2

Query: 5   QKKTRLELWNCLKSIAMIEDLPWIVAGDFNAILXXXXXXXXXXXXMAGCKHFKQCIHDTN 184
           Q   R + W+ L+S+AM    PW++AGDFN IL             A    F+  + D  
Sbjct: 342 QSDLRFKTWDTLRSLAMNPAQPWLMAGDFNEILVAAEKQGGRPKCQAQMDKFRDTLADCG 401

Query: 185 MIDLGFKGPNFTW------SRGNLFERLDRALSN 268
           +ID+GF+G  FTW        G + E LDRA++N
Sbjct: 402 LIDIGFEGDMFTWRNNSHTEEGYIREHLDRAVAN 435


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