BLASTX nr result

ID: Cephaelis21_contig00052271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00052271
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...    81   1e-13
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...    81   1e-13
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...    81   1e-13
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    80   1e-13
gb|AAD40135.1|AF149413_16 contains similarity to retrotransposon...    79   5e-13

>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/75 (50%), Positives = 52/75 (69%)
 Frame = +1

Query: 25   KMGFHLYFVNLIMNCVSTTLYAFNLNGSPGGYVLPTRRIRQGDPISLYLFLIFSEGFSNL 204
            K+GFH  +VNLIM CVST  Y   +NG       P R +RQGDP+S YLFL+ +EGFS L
Sbjct: 796  KLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPERGLRQGDPLSPYLFLLCAEGFSAL 855

Query: 205  ISQSVQNGKLTGVKI 249
            +S++ + G+L G++I
Sbjct: 856  LSKTEEEGRLHGIRI 870


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/75 (50%), Positives = 52/75 (69%)
 Frame = +1

Query: 25   KMGFHLYFVNLIMNCVSTTLYAFNLNGSPGGYVLPTRRIRQGDPISLYLFLIFSEGFSNL 204
            K+GFH  +VNLIM CVST  Y   +NG       P R +RQGDP+S YLFL+ +EGFS L
Sbjct: 824  KLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPERGLRQGDPLSPYLFLLCAEGFSAL 883

Query: 205  ISQSVQNGKLTGVKI 249
            +S++ + G+L G++I
Sbjct: 884  LSKTEEEGRLHGIRI 898


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/75 (50%), Positives = 52/75 (69%)
 Frame = +1

Query: 25   KMGFHLYFVNLIMNCVSTTLYAFNLNGSPGGYVLPTRRIRQGDPISLYLFLIFSEGFSNL 204
            K+GFH  +VNLIM CVST  Y   +NG       P R +RQGDP+S YLFL+ +EGFS L
Sbjct: 792  KLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPERGLRQGDPLSPYLFLLCAEGFSAL 851

Query: 205  ISQSVQNGKLTGVKI 249
            +S++ + G+L G++I
Sbjct: 852  LSKTEEEGRLHGIRI 866


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/75 (50%), Positives = 52/75 (69%)
 Frame = +1

Query: 25   KMGFHLYFVNLIMNCVSTTLYAFNLNGSPGGYVLPTRRIRQGDPISLYLFLIFSEGFSNL 204
            K+GFH  +VNLIM CVST  Y   +NG       P R +RQGDP+S YLFL+ +EGFS L
Sbjct: 851  KLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPGRGLRQGDPLSPYLFLLCAEGFSAL 910

Query: 205  ISQSVQNGKLTGVKI 249
            +S++ + G+L G++I
Sbjct: 911  LSKTEEEGRLHGIRI 925


>gb|AAD40135.1|AF149413_16 contains similarity to retrotransposon Ta11-1 [Arabidopsis
           thaliana]
          Length = 220

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 34/78 (43%), Positives = 56/78 (71%)
 Frame = +1

Query: 28  MGFHLYFVNLIMNCVSTTLYAFNLNGSPGGYVLPTRRIRQGDPISLYLFLIFSEGFSNLI 207
           +GFH  +V L+M+CV+T  Y   +NG P G V+P R +RQGDP+S +LF++ +EG S+L+
Sbjct: 96  LGFHNDWVELVMSCVTTVSYTVLVNGHPHGLVVPQRGLRQGDPLSPFLFVLCTEGLSHLL 155

Query: 208 SQSVQNGKLTGVKISKRG 261
           +++ Q G ++G++ S  G
Sbjct: 156 NRAEQQGLISGMRFSPEG 173


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