BLASTX nr result

ID: Cephaelis21_contig00052203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00052203
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01934.1| hypothetical protein [Beta vulgaris]                   126   2e-27
gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]    123   1e-26
gb|ABG37658.1| integrase [Populus trichocarpa]                        120   9e-26
emb|CAN78232.1| hypothetical protein VITISV_027465 [Vitis vinifera]   118   4e-25
emb|CAB81136.1| putative athila transposon protein [Arabidopsis ...   116   2e-24

>gb|ACY01934.1| hypothetical protein [Beta vulgaris]
          Length = 1717

 Score =  126 bits (316), Expect = 2e-27
 Identities = 60/81 (74%), Positives = 71/81 (87%)
 Frame = -2

Query: 243  QRRLNPLMMEVVKKEIIKLLDHGMIFPISDSEWVSLIQCVPKKGGVTVVKSEGDKLIATR 64
            QRRLNP M EVVKKE++KLLD G+I+PISDS+WVS +Q VPKKGG TVVK+E ++LIATR
Sbjct: 879  QRRLNPNMQEVVKKEVMKLLDAGIIYPISDSKWVSPVQVVPKKGGTTVVKNEKNELIATR 938

Query: 63   VVNAWRVCIDYRKLNKATRKD 1
            VV  WR+CIDYRKLN AT+KD
Sbjct: 939  VVTGWRMCIDYRKLNVATKKD 959


>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score =  123 bits (309), Expect = 1e-26
 Identities = 55/84 (65%), Positives = 70/84 (83%)
 Frame = -2

Query: 252  RERQRRLNPLMMEVVKKEIIKLLDHGMIFPISDSEWVSLIQCVPKKGGVTVVKSEGDKLI 73
            R+ QRRLNP+M E V+K+I+K LDHG+I+PISDS WVS +Q VPKK G+TV+++E ++LI
Sbjct: 835  RDAQRRLNPVMKEAVRKDILKCLDHGIIYPISDSSWVSPVQVVPKKSGITVIQNEANELI 894

Query: 72   ATRVVNAWRVCIDYRKLNKATRKD 1
             TR+   WRVCIDYRKLN ATRKD
Sbjct: 895  PTRIQTGWRVCIDYRKLNLATRKD 918


>gb|ABG37658.1| integrase [Populus trichocarpa]
          Length = 1139

 Score =  120 bits (302), Expect = 9e-26
 Identities = 57/84 (67%), Positives = 68/84 (80%)
 Frame = -2

Query: 252 RERQRRLNPLMMEVVKKEIIKLLDHGMIFPISDSEWVSLIQCVPKKGGVTVVKSEGDKLI 73
           RE QRRLNP M EVVK E+IKLLD+G+I+PISDS+WVS  Q VPKK GVTV+ +E ++LI
Sbjct: 328 REMQRRLNPNMKEVVKNEVIKLLDNGIIYPISDSKWVSPTQVVPKKSGVTVITNEKNELI 387

Query: 72  ATRVVNAWRVCIDYRKLNKATRKD 1
            TR +  WR+CIDYRKLN  TRKD
Sbjct: 388 PTRTITGWRMCIDYRKLNSMTRKD 411


>emb|CAN78232.1| hypothetical protein VITISV_027465 [Vitis vinifera]
          Length = 1629

 Score =  118 bits (296), Expect = 4e-25
 Identities = 53/85 (62%), Positives = 69/85 (81%)
 Frame = -2

Query: 255 IRERQRRLNPLMMEVVKKEIIKLLDHGMIFPISDSEWVSLIQCVPKKGGVTVVKSEGDKL 76
           +R+ QRRLNPLM +VV+ E++KLLD G+I+PISDS WVSL Q VPKK G+TV+K++  +L
Sbjct: 712 VRQPQRRLNPLMQDVVRNEVLKLLDAGIIYPISDSSWVSLTQVVPKKSGITVMKNDEGEL 771

Query: 75  IATRVVNAWRVCIDYRKLNKATRKD 1
           I TR+   WRVCID+RKLN  T+KD
Sbjct: 772 IPTRLTTGWRVCIDFRKLNAVTKKD 796


>emb|CAB81136.1| putative athila transposon protein [Arabidopsis thaliana]
          Length = 724

 Score =  116 bits (290), Expect = 2e-24
 Identities = 57/83 (68%), Positives = 67/83 (80%)
 Frame = -2

Query: 249 ERQRRLNPLMMEVVKKEIIKLLDHGMIFPISDSEWVSLIQCVPKKGGVTVVKSEGDKLIA 70
           E QRRLN  + EVVKKEI+KLLD G+I+PISDS WV  + CVPKKGG+TVVK+E D+LI 
Sbjct: 352 EPQRRLNLNLKEVVKKEILKLLDAGVIYPISDSTWVFPVHCVPKKGGMTVVKNEKDELIP 411

Query: 69  TRVVNAWRVCIDYRKLNKATRKD 1
           TR +   RVCIDYRKLN A+RKD
Sbjct: 412 TRTITGHRVCIDYRKLNAASRKD 434


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