BLASTX nr result

ID: Cephaelis21_contig00052195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00052195
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containi...    99   5e-19
ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containi...    98   6e-19
ref|XP_002521664.1| pentatricopeptide repeat-containing protein,...    96   4e-18
emb|CBI19832.3| unnamed protein product [Vitis vinifera]               95   7e-18
ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containi...    95   7e-18

>ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 43/74 (58%), Positives = 58/74 (78%)
 Frame = -3

Query: 224 IHHVVDMRAVANRYAALLQLCSPRSPTSYSRARTIHAHMITSGFTPKSHILNRLLDVYCK 45
           + + +D+R +ANRYA  LQLCSP+ P S+S AR +HAHMI SGF P+ H LNRLL++YCK
Sbjct: 1   MRNALDIRLLANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCK 60

Query: 44  SCDINYATKLFDEI 3
           S ++ YA +LF+EI
Sbjct: 61  SSNVVYARQLFEEI 74


>ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 43/74 (58%), Positives = 58/74 (78%)
 Frame = -3

Query: 224 IHHVVDMRAVANRYAALLQLCSPRSPTSYSRARTIHAHMITSGFTPKSHILNRLLDVYCK 45
           + + +D+R +ANRYA  LQLCSP+ P S+S AR +HAHMI SGF P+ H LNRLL++YCK
Sbjct: 1   MRNALDIRLLANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCK 60

Query: 44  SCDINYATKLFDEI 3
           S ++ YA +LF+EI
Sbjct: 61  SSNLVYARQLFEEI 74


>ref|XP_002521664.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539055|gb|EEF40651.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 574

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/74 (63%), Positives = 53/74 (71%)
 Frame = -3

Query: 224 IHHVVDMRAVANRYAALLQLCSPRSPTSYSRARTIHAHMITSGFTPKSHILNRLLDVYCK 45
           I HV   R  AN YA+LLQLC P+SP SY  ARTIHAHMI SGF P  H LNRL+ +YCK
Sbjct: 8   IEHV---RTAANHYASLLQLCCPQSPISYPFARTIHAHMIASGFKPHGHTLNRLIYIYCK 64

Query: 44  SCDINYATKLFDEI 3
           S  ++YA  LFDEI
Sbjct: 65  SSKLSYARSLFDEI 78


>emb|CBI19832.3| unnamed protein product [Vitis vinifera]
          Length = 544

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 44/74 (59%), Positives = 56/74 (75%)
 Frame = -3

Query: 224 IHHVVDMRAVANRYAALLQLCSPRSPTSYSRARTIHAHMITSGFTPKSHILNRLLDVYCK 45
           + +  ++R +AN+YAA LQ C P +P SYS ART+HAHMI SGF P+ +ILNRL+DVYCK
Sbjct: 1   MRNAANVRRLANQYAAQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCK 60

Query: 44  SCDINYATKLFDEI 3
           S D+  A  LFDEI
Sbjct: 61  SSDLVSAHHLFDEI 74


>ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 44/74 (59%), Positives = 56/74 (75%)
 Frame = -3

Query: 224 IHHVVDMRAVANRYAALLQLCSPRSPTSYSRARTIHAHMITSGFTPKSHILNRLLDVYCK 45
           + +  ++R +AN+YAA LQ C P +P SYS ART+HAHMI SGF P+ +ILNRL+DVYCK
Sbjct: 3   MRNAANVRRLANQYAAQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCK 62

Query: 44  SCDINYATKLFDEI 3
           S D+  A  LFDEI
Sbjct: 63  SSDLVSAHHLFDEI 76


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