BLASTX nr result

ID: Cephaelis21_contig00052066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00052066
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]          82   6e-14
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    71   8e-11
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              66   3e-09
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              66   3e-09
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              66   3e-09

>gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]
          Length = 593

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
 Frame = -2

Query: 285 LEKIFANFIWGSSEHGHKYHWRRWKDLCFPVEEGGLGFRNLSDIVSASVGKL*WRFKSL- 109
           +EK+  NF WG   +G K HWR W+ LC     GGLGFR L +   A + K  WR  +L 
Sbjct: 58  IEKMMCNFYWGGDRNGSKMHWRSWEKLCRSKRNGGLGFRRLKNFNRAMLAKQGWRLLTLP 117

Query: 108 DSLWAKFLTFKYVKGLHPNEISLHPGASHTWKNML 4
           +SL A  L  KY     P EIS  P +S+TW+++L
Sbjct: 118 NSLAATILRAKYYPRKSPLEISSSPYSSYTWRSIL 152


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 41/95 (43%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
 Frame = -2

Query: 285  LEKIFANFIWGSSEHGHKYHWRRWKDLCFPVEEGGLGFRNLSDIVSASVGKL*WRFKSL- 109
            + K  A F WG  E G   HWRRW DLCF  ++GGLGFR+LS    A +GK  WR     
Sbjct: 1106 INKCVARFWWGK-EGGKGIHWRRWSDLCFSKKDGGLGFRDLSLFNQALLGKQGWRLMMYP 1164

Query: 108  DSLWAKFLTFKYVKGLHPNEISLHPGASHTWKNML 4
            DSL A+ L  KY       E  L    S+ W++ L
Sbjct: 1165 DSLVARMLKAKYFPWDDFMEAELGSSPSYLWRSFL 1199


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
 Frame = -2

Query: 285  LEKIFANFIWGSSEHGHKYHWRRWKDLCFPVEEGGLGFRNLSDIVSASVGKL*WR-FKSL 109
            ++K   NF+WG   +  K H   W ++C P  EGGLG R   D   A + K+ W+ F ++
Sbjct: 1354 IDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNI 1413

Query: 108  DSLWAKFLTFKYVKGLHPNEISLHPGASHTWKNML 4
            D LW K L  KYVK      +      S  W++++
Sbjct: 1414 DKLWVKVLREKYVKNADFLHLQSQSNCSWGWRSIM 1448


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
 Frame = -2

Query: 285  LEKIFANFIWGSSEHGHKYHWRRWKDLCFPVEEGGLGFRNLSDIVSASVGKL*WR-FKSL 109
            ++K   NF+WG   +  K H   W ++C P  EGGLG R   D   A + K+ W+ F ++
Sbjct: 822  IDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNI 881

Query: 108  DSLWAKFLTFKYVKGLHPNEISLHPGASHTWKNML 4
            D LW K L  KYVK      +      S  W++++
Sbjct: 882  DKLWVKVLREKYVKNADFLHLQSQSNCSWGWRSIM 916


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
 Frame = -2

Query: 285  LEKIFANFIWGSSEHGHKYHWRRWKDLCFPVEEGGLGFRNLSDIVSASVGKL*WR-FKSL 109
            ++K   NF+WG   +  K H   W ++C P  EGGLG R   D   A + K+ W+ F ++
Sbjct: 822  IDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNI 881

Query: 108  DSLWAKFLTFKYVKGLHPNEISLHPGASHTWKNML 4
            D LW K L  KYVK      +      S  W++++
Sbjct: 882  DKLWVKVLREKYVKNADFLHLQSQSNCSWGWRSIM 916


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