BLASTX nr result

ID: Cephaelis21_contig00052011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00052011
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containi...   152   2e-35
emb|CBI16090.3| unnamed protein product [Vitis vinifera]              152   2e-35
ref|XP_004160205.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   131   5e-29
ref|XP_004143208.1| PREDICTED: pentatricopeptide repeat-containi...   131   5e-29
ref|XP_002520529.1| pentatricopeptide repeat-containing protein,...   128   6e-28

>ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 628

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/99 (72%), Positives = 84/99 (84%)
 Frame = +3

Query: 3   WDQISWNAVIAGFSNLGIGEEALNCFSKMRQVGISVDVFTYASVLKAIGTISALEEGKQI 182
           WDQISWNAVI G SNLG GE AL CFSKMRQ GI +D+FT+ SVL+AIG IS L+EGKQI
Sbjct: 347 WDQISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEGKQI 406

Query: 183 HSLVIKGGYASNLCALNGLVSMFSRCGNLNDAKKVFSLM 299
           H+LV+K GY SNL   NGLVSM++RCG++NDAK+VFSLM
Sbjct: 407 HALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLM 445



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/96 (29%), Positives = 57/96 (59%)
 Frame = +3

Query: 12  ISWNAVIAGFSNLGIGEEALNCFSKMRQVGISVDVFTYASVLKAIGTISALEEGKQIHSL 191
           ++WN++I+G+ ++G  E A+  F +M +VGI    F+ ++VL     +   + G Q+H L
Sbjct: 146 VTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHGL 205

Query: 192 VIKGGYASNLCALNGLVSMFSRCGNLNDAKKVFSLM 299
            +K G+  N+     L+ ++S+  N++ ++ +F LM
Sbjct: 206 SMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLM 241


>emb|CBI16090.3| unnamed protein product [Vitis vinifera]
          Length = 458

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/99 (72%), Positives = 84/99 (84%)
 Frame = +3

Query: 3   WDQISWNAVIAGFSNLGIGEEALNCFSKMRQVGISVDVFTYASVLKAIGTISALEEGKQI 182
           WDQISWNAVI G SNLG GE AL CFSKMRQ GI +D+FT+ SVL+AIG IS L+EGKQI
Sbjct: 177 WDQISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEGKQI 236

Query: 183 HSLVIKGGYASNLCALNGLVSMFSRCGNLNDAKKVFSLM 299
           H+LV+K GY SNL   NGLVSM++RCG++NDAK+VFSLM
Sbjct: 237 HALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLM 275


>ref|XP_004160205.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11290-like [Cucumis sativus]
          Length = 616

 Score =  131 bits (330), Expect = 5e-29
 Identities = 65/98 (66%), Positives = 75/98 (76%)
 Frame = +3

Query: 6   DQISWNAVIAGFSNLGIGEEALNCFSKMRQVGISVDVFTYASVLKAIGTISALEEGKQIH 185
           DQISWNAVIAGF+NLGIGEEAL CF +MR+    VD FT+ S+ KAIG  SALEEGKQIH
Sbjct: 336 DQISWNAVIAGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIH 395

Query: 186 SLVIKGGYASNLCALNGLVSMFSRCGNLNDAKKVFSLM 299
            LV K GY  NL   NGLVSM++R G + D+K VFS+M
Sbjct: 396 GLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMM 433



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/96 (29%), Positives = 56/96 (58%)
 Frame = +3

Query: 12  ISWNAVIAGFSNLGIGEEALNCFSKMRQVGISVDVFTYASVLKAIGTISALEEGKQIHSL 191
           ++WN+++ G+   G    A++ F +M + GI    F+ +  L     +   + G Q+H++
Sbjct: 135 VTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAM 194

Query: 192 VIKGGYASNLCALNGLVSMFSRCGNLNDAKKVFSLM 299
            +K  ++SN+    GL+ M+S+C NL D+++VF +M
Sbjct: 195 SLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIM 230


>ref|XP_004143208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 616

 Score =  131 bits (330), Expect = 5e-29
 Identities = 65/98 (66%), Positives = 75/98 (76%)
 Frame = +3

Query: 6   DQISWNAVIAGFSNLGIGEEALNCFSKMRQVGISVDVFTYASVLKAIGTISALEEGKQIH 185
           DQISWNAVIAGF+NLGIGEEAL CF +MR+    VD FT+ S+ KAIG  SALEEGKQIH
Sbjct: 336 DQISWNAVIAGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIH 395

Query: 186 SLVIKGGYASNLCALNGLVSMFSRCGNLNDAKKVFSLM 299
            LV K GY  NL   NGLVSM++R G + D+K VFS+M
Sbjct: 396 GLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMM 433



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/96 (29%), Positives = 56/96 (58%)
 Frame = +3

Query: 12  ISWNAVIAGFSNLGIGEEALNCFSKMRQVGISVDVFTYASVLKAIGTISALEEGKQIHSL 191
           ++WN+++ G+   G    A++ F +M + GI    F+ +  L     +   + G Q+H++
Sbjct: 135 VTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAM 194

Query: 192 VIKGGYASNLCALNGLVSMFSRCGNLNDAKKVFSLM 299
            +K  ++SN+    GL+ M+S+C NL D+++VF +M
Sbjct: 195 SLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIM 230


>ref|XP_002520529.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540371|gb|EEF41942.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 606

 Score =  128 bits (321), Expect = 6e-28
 Identities = 57/98 (58%), Positives = 80/98 (81%)
 Frame = +3

Query: 6   DQISWNAVIAGFSNLGIGEEALNCFSKMRQVGISVDVFTYASVLKAIGTISALEEGKQIH 185
           DQISWNAVIAG+SNLG+GE+AL CF +MR   I +D +T+ S+L AIG   A+EEG+++H
Sbjct: 326 DQISWNAVIAGYSNLGLGEDALKCFCEMRHANIKMDFYTFTSLLGAIGAFLAIEEGREMH 385

Query: 186 SLVIKGGYASNLCALNGLVSMFSRCGNLNDAKKVFSLM 299
           +L++K GYAS++   NGLVSM++RCG ++D+K+VF LM
Sbjct: 386 ALIVKTGYASSVYVQNGLVSMYARCGAIDDSKRVFWLM 423