BLASTX nr result

ID: Cephaelis21_contig00051463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00051463
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37965.3| unnamed protein product [Vitis vinifera]              203   1e-50
ref|XP_002275925.1| PREDICTED: putative pentatricopeptide repeat...   203   1e-50
ref|XP_002513017.1| pentatricopeptide repeat-containing protein,...   198   3e-49
ref|XP_002279703.2| PREDICTED: pentatricopeptide repeat-containi...   196   2e-48
ref|XP_003604017.1| Pentatricopeptide repeat-containing protein ...   195   4e-48

>emb|CBI37965.3| unnamed protein product [Vitis vinifera]
          Length = 371

 Score =  203 bits (517), Expect = 1e-50
 Identities = 98/143 (68%), Positives = 114/143 (79%)
 Frame = -2

Query: 434 ADVFLQSLLIEMYGKCGLVEKAKQIFSGAVFKEDGEKKRDVVLWTSMLGVYGKNGNYESV 255
           ADVFLQS LIEMYGKCG VEKA Q+F+ A F   GE+KRDVVLWTSML V G+NG++E V
Sbjct: 146 ADVFLQSSLIEMYGKCGSVEKAWQVFNLAGFGYKGERKRDVVLWTSMLAVCGRNGHFEKV 205

Query: 254 IRLFIDMLNEGIRPDGVAFLSVISACGHTGQVDLAFDYFASMARDFALIQGPEHYSCLID 75
           I L+ +ML EGIRPDGVAF++VISACGHTG V L   YF SM  DF L  GPEHYSC++D
Sbjct: 206 IELYKEMLREGIRPDGVAFVTVISACGHTGHVKLGIKYFESMVSDFGLEPGPEHYSCVVD 265

Query: 74  SLCRAGELDKAWKLINEMPCEVN 6
            LCRAGEL+KAWK++NEM  + N
Sbjct: 266 LLCRAGELEKAWKMVNEMTLKEN 288


>ref|XP_002275925.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Vitis vinifera]
          Length = 349

 Score =  203 bits (517), Expect = 1e-50
 Identities = 98/143 (68%), Positives = 114/143 (79%)
 Frame = -2

Query: 434 ADVFLQSLLIEMYGKCGLVEKAKQIFSGAVFKEDGEKKRDVVLWTSMLGVYGKNGNYESV 255
           ADVFLQS LIEMYGKCG VEKA Q+F+ A F   GE+KRDVVLWTSML V G+NG++E V
Sbjct: 124 ADVFLQSSLIEMYGKCGSVEKAWQVFNLAGFGYKGERKRDVVLWTSMLAVCGRNGHFEKV 183

Query: 254 IRLFIDMLNEGIRPDGVAFLSVISACGHTGQVDLAFDYFASMARDFALIQGPEHYSCLID 75
           I L+ +ML EGIRPDGVAF++VISACGHTG V L   YF SM  DF L  GPEHYSC++D
Sbjct: 184 IELYKEMLREGIRPDGVAFVTVISACGHTGHVKLGIKYFESMVSDFGLEPGPEHYSCVVD 243

Query: 74  SLCRAGELDKAWKLINEMPCEVN 6
            LCRAGEL+KAWK++NEM  + N
Sbjct: 244 LLCRAGELEKAWKMVNEMTLKEN 266


>ref|XP_002513017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548028|gb|EEF49520.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 349

 Score =  198 bits (504), Expect = 3e-49
 Identities = 90/137 (65%), Positives = 112/137 (81%)
 Frame = -2

Query: 431 DVFLQSLLIEMYGKCGLVEKAKQIFSGAVFKEDGEKKRDVVLWTSMLGVYGKNGNYESVI 252
           DVF+QS LIEMYGKCG V KA Q+ + A F+   ++ +D+VLWTSMLGVYG+NG++E VI
Sbjct: 125 DVFMQSSLIEMYGKCGYVGKALQVLNFAGFRPGRKRNKDIVLWTSMLGVYGRNGHFEEVI 184

Query: 251 RLFIDMLNEGIRPDGVAFLSVISACGHTGQVDLAFDYFASMARDFALIQGPEHYSCLIDS 72
            LF +ML EG+RPDGVA+++VISACGHTGQV L  +YF SM+RDF L   PEHYSC++D 
Sbjct: 185 SLFEEMLKEGVRPDGVAYVTVISACGHTGQVQLGIEYFESMSRDFNLTPSPEHYSCVVDL 244

Query: 71  LCRAGELDKAWKLINEM 21
            CRAGELD+AWKL+NEM
Sbjct: 245 FCRAGELDRAWKLVNEM 261


>ref|XP_002279703.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 327

 Score =  196 bits (497), Expect = 2e-48
 Identities = 93/143 (65%), Positives = 113/143 (79%)
 Frame = -2

Query: 434 ADVFLQSLLIEMYGKCGLVEKAKQIFSGAVFKEDGEKKRDVVLWTSMLGVYGKNGNYESV 255
           ADVFLQS LIEMYGKCG VEKA ++F+ A F   GE+KRDVVLWTSML V G+NG++E V
Sbjct: 99  ADVFLQSSLIEMYGKCGSVEKAWEVFNLAGFGYKGERKRDVVLWTSMLAVCGRNGHFEKV 158

Query: 254 IRLFIDMLNEGIRPDGVAFLSVISACGHTGQVDLAFDYFASMARDFALIQGPEHYSCLID 75
           I L+ +ML EGIRPDGVAF+++ISACGHTG V L  +YF SM  DF L   PE+Y C++D
Sbjct: 159 IELYKEMLREGIRPDGVAFVTIISACGHTGHVKLGIEYFESMVSDFGLEPRPEYYRCVVD 218

Query: 74  SLCRAGELDKAWKLINEMPCEVN 6
            LCRAGEL+KAWK++NEM  + N
Sbjct: 219 LLCRAGELEKAWKMVNEMTSKEN 241


>ref|XP_003604017.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355493065|gb|AES74268.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 742

 Score =  195 bits (495), Expect = 4e-48
 Identities = 95/142 (66%), Positives = 112/142 (78%), Gaps = 5/142 (3%)
 Frame = -2

Query: 434 ADVFLQSLLIEMYGKCGLVEKAKQIFSGAVFKEDG-----EKKRDVVLWTSMLGVYGKNG 270
           +DVFLQS LIEMYGKCG+VEKA+      VFK DG     E+ RDVV WTSMLGVYGKNG
Sbjct: 433 SDVFLQSTLIEMYGKCGMVEKAQ-----LVFKLDGMDIRKERSRDVVFWTSMLGVYGKNG 487

Query: 269 NYESVIRLFIDMLNEGIRPDGVAFLSVISACGHTGQVDLAFDYFASMARDFALIQGPEHY 90
           +Y+ VI L+ +ML EGI+PDG++FL++ISACGHTGQVD    YF SM  DF L  GPEHY
Sbjct: 488 HYKEVIDLYSEMLREGIKPDGISFLTIISACGHTGQVDAGVKYFESMTNDFKLDPGPEHY 547

Query: 89  SCLIDSLCRAGELDKAWKLINE 24
           SCL+D LCRAGEL+KAW+L+NE
Sbjct: 548 SCLVDLLCRAGELNKAWELLNE 569


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