BLASTX nr result

ID: Cephaelis21_contig00051431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00051431
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...    74   2e-11
ref|XP_002516692.1| conserved hypothetical protein [Ricinus comm...    65   6e-09
ref|XP_002328601.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              64   1e-08
ref|XP_003561383.1| PREDICTED: uncharacterized protein LOC100823...    64   1e-08

>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 2/145 (1%)
 Frame = -2

Query: 455 SLLMKLGVQLLTRREALWVKVLRSKYRLQDHIPERI--QKGRTPHIMSSLASVWEMIKQN 282
           + LMK+   L+ + + LW +VL SKY   + +   I  Q   +P +  ++  +W+  K++
Sbjct: 294 AFLMKMLWNLIKQPDKLWCRVLYSKYGRNNDLNNNISSQPYDSP-LWKAIVGIWDDFKRH 352

Query: 281 TYWVLGNGKKIKFWTDKWIPEIGRLMPHCLNHAIIDSEARVADLAMPNGEWNWNLLETVL 102
             W +G+G+   FW DKWI     L       + +D+   V D    +G W+ N L   L
Sbjct: 353 VIWQIGDGRSTNFWLDKWISNNTSLFSSS-TQSYVDTTISVRDAINTSGVWDLNFLMDNL 411

Query: 101 ELNIVHIIAGYPAPKPGDVEDNYSW 27
            ++IV+ I   P P   D  D   W
Sbjct: 412 HVDIVNQILALPTPSDFDGPDTIGW 436


>ref|XP_002516692.1| conserved hypothetical protein [Ricinus communis]
           gi|223544187|gb|EEF45711.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 229

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
 Frame = -2

Query: 296 MIKQNTYWVLGNGKKIKFWTDKWIPEIGRLMPH---CLNHAIIDSEARVADLAMPNGEWN 126
           M K     ++ NG+  KFW D WIPE+G L+ H    L+H +ID    V +    + +WN
Sbjct: 55  MSKSGVIKIVNNGESAKFWIDNWIPELGHLVHHVFRSLSHYLID--GLVKEFVDSSSQWN 112

Query: 125 WNLLETVLELNIVHIIAGYPAPKPGDVEDNYSWKL*RSDKF 3
           WN+L  +L  ++   +A    P     ED  SW    S KF
Sbjct: 113 WNVLNGLLPYHVTFKLAALSTPCAELGEDGISWGFSFSRKF 153


>ref|XP_002328601.1| predicted protein [Populus trichocarpa] gi|222838583|gb|EEE76948.1|
           predicted protein [Populus trichocarpa]
          Length = 230

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
 Frame = -2

Query: 344 KGRTPHIMSSLASVWEMIKQNTYWVLGNGKKIKFWTDKWIPEIGRLMPHCLNHA-IIDSE 168
           K R   +  ++      I +   W LGN   + FW D+W+   G L+ H  +     D  
Sbjct: 5   KNRDSPLWKAICKEMPFIMEGMGWSLGNDMSVSFWKDQWVDGSGPLIQHATSDIPTTDRY 64

Query: 167 ARVADLAMPNGEWNWNLLETVLELNIVHIIAGYPAPKPGDVEDNYSWK 24
           A VAD+   + +W+W+    ++ +N++ II   PAP+    ED   W+
Sbjct: 65  ATVADMVTSDNKWDWDTFSQLIPVNVLIIITSIPAPRYEMDEDTVFWR 112


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
 Frame = -2

Query: 455  SLLMKLGVQLLTRREALWVKVLRSKYRLQDHIPERIQKGRTPHIMSSLASVW-------- 300
            + L K+  Q+ +  + LWVKVLR KY         ++     H+ S     W        
Sbjct: 1400 AFLTKMAWQIFSNIDKLWVKVLREKY---------VKNADFLHLQSQSNCSWGWRSIMKG 1450

Query: 299  -EMIKQNTYWVLGNGKKIKFWTDKWIPEIGRLMPH--CLNHAIIDSEARVADLAMPNGEW 129
             +++     W +GNG+KI FW D W+ + G L  +  C+N   + ++ +V DL      W
Sbjct: 1451 KDVLAGAIKWNVGNGRKINFWNDWWVGD-GPLASNTDCINQPHM-TDIKVEDLTTSQRRW 1508

Query: 128  NWNLLETVLELNIVHIIAGYPAPKPGDVEDNYSW 27
            +   L  +L +N++ ++   P     + ED  SW
Sbjct: 1509 DTGALHNILPINMIDMVRATPIAINSEQEDFPSW 1542


>ref|XP_003561383.1| PREDICTED: uncharacterized protein LOC100823728 [Brachypodium
           distachyon]
          Length = 865

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
 Frame = -2

Query: 455 SLLMKLGVQLLTRREALWVKVLRSKYRLQDHIPERIQKGRTPHIMSSLASVWEMIKQNTY 276
           +LL K   +L+ + ++L  ++LR+KY  + +I + I  G       ++    E++K+   
Sbjct: 379 ALLAKQSWRLIQKPDSLCARLLRTKYYPEGNIVDTIFTGNASSSWKAIEHGLELLKKGVI 438

Query: 275 WVLGNGKKIKFWTDKWIPEIGRLMP------HCLNHAIIDSEARVADLAMPNGEWN 126
           W +G+G K++ W D WIP +  + P       CL          V+DL  PNGEW+
Sbjct: 439 WRIGDGSKVRIWRDPWIPRVFSMKPITQRGNSCLKW--------VSDLLEPNGEWD 486


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