BLASTX nr result

ID: Cephaelis21_contig00051227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00051227
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002324246.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|YP_006666138.1| RnaseH (mitochondrion) [Malus x domestica] g...    55   8e-06

>ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|222863748|gb|EEF00879.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/65 (46%), Positives = 41/65 (63%)
 Frame = +2

Query: 5   GTASVGGLIRDSSGSWIHGFAQTIRFGDILSTECSALLIGLKAAKDLGLNKIELESDSSV 184
           G A  GG+IRD  G+WI GFA+ I     ++ E  A+ +GL+ A D G  K++LESDS V
Sbjct: 97  GVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLAWDRGFRKVDLESDSKV 156

Query: 185 AVELL 199
            V L+
Sbjct: 157 VVGLI 161


>ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|222852892|gb|EEE90439.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/65 (46%), Positives = 41/65 (63%)
 Frame = +2

Query: 5   GTASVGGLIRDSSGSWIHGFAQTIRFGDILSTECSALLIGLKAAKDLGLNKIELESDSSV 184
           G A  GG+IRD  G+WI GFA+ I     ++ E  A+ +GL+ A D G  K++LESDS V
Sbjct: 97  GVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLAWDRGFRKVDLESDSKV 156

Query: 185 AVELL 199
            V L+
Sbjct: 157 VVGLI 161


>ref|XP_002324246.1| predicted protein [Populus trichocarpa] gi|222865680|gb|EEF02811.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/65 (44%), Positives = 41/65 (63%)
 Frame = +2

Query: 5   GTASVGGLIRDSSGSWIHGFAQTIRFGDILSTECSALLIGLKAAKDLGLNKIELESDSSV 184
           G A  GG+IR+  G+WI GFA+ I     ++ E  A+ +GL+ A D G  K++LESDS V
Sbjct: 97  GVAGAGGVIREHLGAWIGGFARNIDICSSVNAELWAVYVGLQLAWDRGFRKVDLESDSKV 156

Query: 185 AVELL 199
            V L+
Sbjct: 157 VVGLI 161


>ref|YP_006666138.1| RnaseH (mitochondrion) [Malus x domestica]
           gi|401661941|emb|CBX33402.1| rnaseH (mitochondrion)
           [Malus x domestica]
          Length = 153

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/69 (36%), Positives = 41/69 (59%)
 Frame = +2

Query: 2   NGTASVGGLIRDSSGSWIHGFAQTIRFGDILSTECSALLIGLKAAKDLGLNKIELESDSS 181
           +G+   GGL+RD++G+WI GF   +  G I++ E   L  GL+ A   G   +E+E DS+
Sbjct: 5   SGSIGAGGLLRDNNGNWISGFTANLGKGKIIAAELWGLFFGLRLAWMRGFRSVEVEVDSA 64

Query: 182 VAVELLKKK 208
             V L+ ++
Sbjct: 65  TVVTLVNQQ 73


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