BLASTX nr result

ID: Cephaelis21_contig00051198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00051198
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK33630.1| unknown [Lotus japonicus]                               81   8e-14
ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
ref|XP_003612457.1| Pentatricopeptide repeat-containing protein ...    73   2e-11
ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containi...    62   5e-08
emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera]    62   5e-08

>gb|AFK33630.1| unknown [Lotus japonicus]
          Length = 356

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 36/76 (47%), Positives = 51/76 (67%)
 Frame = -2

Query: 233 PVTLDLYLSFIQECTKTRDTVQAIELHNHIRTSSLRPSLPIFNRLLLMYGSCHCIDYAEK 54
           P+ +D+Y S I+ECT + D   AIELH HI  S ++P L   NR+L+M+ SC  +DYA +
Sbjct: 27  PIPIDIYTSLIKECTLSPDPQTAIELHTHIAHSGIKPPLSFINRILVMFVSCGLLDYACQ 86

Query: 53  LFERMSVRSVNSWAAM 6
           LF+ M V+  NSWA +
Sbjct: 87  LFDAMPVKDFNSWATL 102


>ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Glycine max]
          Length = 423

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 34/76 (44%), Positives = 50/76 (65%)
 Frame = -2

Query: 233 PVTLDLYLSFIQECTKTRDTVQAIELHNHIRTSSLRPSLPIFNRLLLMYGSCHCIDYAEK 54
           PV +D+Y S I+ECT + D   AIEL  HI  S ++P LP  NR+L+M+ SC  ++ A  
Sbjct: 94  PVPIDIYTSLIKECTVSGDPETAIELATHISKSGIKPPLPFLNRILVMFVSCGLLENARH 153

Query: 53  LFERMSVRSVNSWAAM 6
           +F++M VR  N+WA +
Sbjct: 154 MFDKMRVRDFNTWATL 169


>ref|XP_003612457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513792|gb|AES95415.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 418

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 32/76 (42%), Positives = 50/76 (65%)
 Frame = -2

Query: 233 PVTLDLYLSFIQECTKTRDTVQAIELHNHIRTSSLRPSLPIFNRLLLMYGSCHCIDYAEK 54
           P+T+D+Y S ++ECT + D   AIELH  I T  +   L + NR+L+M+ SC  ++ A +
Sbjct: 87  PITIDIYTSLVKECTLSTDPETAIELHTQIITRGIELPLTLLNRILIMFVSCGLLENARR 146

Query: 53  LFERMSVRSVNSWAAM 6
           +F+ MSVR  +SWA +
Sbjct: 147 VFDVMSVRDFHSWATL 162


>ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Vitis vinifera]
          Length = 414

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
 Frame = -2

Query: 233 PVTLDLYLSFIQECTKTRDTVQAIELHNHIRTSSLRPSLPIFNRLLLMYGSCHCIDYAEK 54
           P+  D+Y S I+E + T D  QA +L  HI  S L  S  + NR+LLMY SC  I  A  
Sbjct: 74  PIPPDIYASLIKESSTTGDATQATQLLAHINRSGLPLSSALLNRILLMYVSCGLIHTARH 133

Query: 53  LFERMSVRSVN--SWAAMI 3
           +F++M+V + N  SWA M+
Sbjct: 134 MFDKMNVLNKNSISWAIML 152


>emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera]
          Length = 543

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
 Frame = -2

Query: 233 PVTLDLYLSFIQECTKTRDTVQAIELHNHIRTSSLRPSLPIFNRLLLMYGSCHCIDYAEK 54
           P+  D+Y S I+E + T D  QA +L  HI  S L  S  + NR+LLMY SC  I  A  
Sbjct: 237 PIPPDIYASLIKESSTTGDATQATQLLAHINRSGLPLSSALLNRILLMYVSCGLIHTARH 296

Query: 53  LFERMSVRSVN--SWAAMI 3
           +F++M+V + N  SWA M+
Sbjct: 297 MFDKMNVLNKNSISWAIML 315