BLASTX nr result

ID: Cephaelis21_contig00051116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00051116
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like...    95   7e-18
ref|XP_002880959.1| predicted protein [Arabidopsis lyrata subsp....    86   2e-15
ref|NP_180361.1| RING-H2 finger protein ATL57 [Arabidopsis thali...    86   2e-15
ref|XP_002523741.1| zinc finger protein, putative [Ricinus commu...    84   2e-14
ref|XP_002298167.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13

>ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like [Vitis vinifera]
          Length = 244

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 39/68 (57%), Positives = 52/68 (76%)
 Frame = -2

Query: 238 SYGGGAKQRVKNAADDCPICLSEFEEKEIVKLIPHCRHLFHAECLDMWLASHVSCPVCRT 59
           SY G AK+ +     DCP+CL++FE+K+ VK+IP+CRH+FH  C+D WL+SHVSCPVCR+
Sbjct: 124 SYHGDAKETL-----DCPVCLTQFEDKDTVKIIPYCRHVFHPPCIDTWLSSHVSCPVCRS 178

Query: 58  TQFFNTAD 35
           TQ F   D
Sbjct: 179 TQLFPAKD 186


>ref|XP_002880959.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326798|gb|EFH57218.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 234

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 34/58 (58%), Positives = 45/58 (77%)
 Frame = -2

Query: 208 KNAADDCPICLSEFEEKEIVKLIPHCRHLFHAECLDMWLASHVSCPVCRTTQFFNTAD 35
           K   +DC ICLSEFEE E VK+IPHC H+FH +C+D WL+S+V+CP+CR+ Q F+  D
Sbjct: 131 KQRNEDCVICLSEFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSNQLFSDKD 188


>ref|NP_180361.1| RING-H2 finger protein ATL57 [Arabidopsis thaliana]
           gi|68565332|sp|Q9SJJ7.1|ATL57_ARATH RecName:
           Full=RING-H2 finger protein ATL57
           gi|4510422|gb|AAD21508.1| putative RING zinc finger
           protein [Arabidopsis thaliana]
           gi|26452105|dbj|BAC43142.1| putative RING finger protein
           [Arabidopsis thaliana] gi|28950793|gb|AAO63320.1|
           At2g27940 [Arabidopsis thaliana]
           gi|330252968|gb|AEC08062.1| RING-H2 finger protein ATL57
           [Arabidopsis thaliana]
          Length = 237

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 37/67 (55%), Positives = 49/67 (73%)
 Frame = -2

Query: 235 YGGGAKQRVKNAADDCPICLSEFEEKEIVKLIPHCRHLFHAECLDMWLASHVSCPVCRTT 56
           Y   AKQR     +DC ICLS+FEE E VK+IPHC H+FH +C+D WL+S+V+CP+CR+ 
Sbjct: 129 YTKAAKQR----NEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSN 184

Query: 55  QFFNTAD 35
           Q F+  D
Sbjct: 185 QLFSDKD 191


>ref|XP_002523741.1| zinc finger protein, putative [Ricinus communis]
           gi|223537045|gb|EEF38681.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 254

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 35/62 (56%), Positives = 45/62 (72%)
 Frame = -2

Query: 235 YGGGAKQRVKNAADDCPICLSEFEEKEIVKLIPHCRHLFHAECLDMWLASHVSCPVCRTT 56
           Y G AK ++     +C +CL EFEEKE VK IP+C+H+FH EC++ WL  HV+CPVCR T
Sbjct: 122 YHGEAKYQI-----ECAVCLGEFEEKETVKSIPYCKHMFHLECIETWLKLHVTCPVCRGT 176

Query: 55  QF 50
           QF
Sbjct: 177 QF 178


>ref|XP_002298167.1| predicted protein [Populus trichocarpa] gi|222845425|gb|EEE82972.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 34/62 (54%), Positives = 42/62 (67%)
 Frame = -2

Query: 235 YGGGAKQRVKNAADDCPICLSEFEEKEIVKLIPHCRHLFHAECLDMWLASHVSCPVCRTT 56
           Y G  K ++     +C ICL EFEEKE VK+IP C H+FH +C+D WL  HV+CPVCR  
Sbjct: 78  YHGDVKYQI-----ECAICLGEFEEKEAVKMIPKCHHVFHLQCIDTWLEMHVTCPVCRGA 132

Query: 55  QF 50
           QF
Sbjct: 133 QF 134