BLASTX nr result

ID: Cephaelis21_contig00051099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00051099
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134767.1| PREDICTED: probable rhamnogalacturonate lyas...    51   7e-14
ref|XP_002317123.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-13
ref|XP_002880453.1| hypothetical protein ARALYDRAFT_481121 [Arab...    49   3e-09
ref|XP_004136251.1| PREDICTED: rhamnogalacturonate lyase B-like ...    45   9e-09
ref|XP_004161743.1| PREDICTED: LOW QUALITY PROTEIN: rhamnogalact...    45   9e-09

>ref|XP_004134767.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Cucumis
           sativus] gi|449479483|ref|XP_004155611.1| PREDICTED:
           probable rhamnogalacturonate lyase B-like [Cucumis
           sativus]
          Length = 522

 Score = 50.8 bits (120), Expect(3) = 7e-14
 Identities = 20/45 (44%), Positives = 29/45 (64%)
 Frame = +1

Query: 1   VQSAYRLRQYELWDGCTDTHPESDVVFTISVRHPRKDRFFAHADR 135
           + S  + RQY LW+G +D HP +D +FT+ +  P+KD FFA   R
Sbjct: 356 LHSPEKFRQYGLWEGYSDLHPRNDQIFTVGINDPKKDWFFAQVCR 400



 Score = 35.4 bits (80), Expect(3) = 7e-14
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +3

Query: 228 IIERRKAEKYCPSTWEIKFNLTSLSSGVYK 317
           +  R +  KY  +TW IKFN+TSL+ G Y+
Sbjct: 398 VCRRGEDGKYVATTWTIKFNMTSLTDGTYR 427



 Score = 35.0 bits (79), Expect(3) = 7e-14
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = +2

Query: 386 VCRHGIHGLHRLSSIDISSS 445
           VCRHG HGL+R+ SIDI SS
Sbjct: 466 VCRHGNHGLYRIYSIDIPSS 485


>ref|XP_002317123.1| predicted protein [Populus trichocarpa] gi|222860188|gb|EEE97735.1|
           predicted protein [Populus trichocarpa]
          Length = 650

 Score = 56.6 bits (135), Expect(2) = 2e-13
 Identities = 25/45 (55%), Positives = 29/45 (64%)
 Frame = +1

Query: 1   VQSAYRLRQYELWDGCTDTHPESDVVFTISVRHPRKDRFFAHADR 135
           V S  + RQY LWD  TD HPE D  FTI +  P+K+ FFAH DR
Sbjct: 469 VNSPEKFRQYGLWDRYTDVHPEYDQTFTIGISDPKKNWFFAHVDR 513



 Score = 43.5 bits (101), Expect(2) = 2e-13
 Identities = 22/63 (34%), Positives = 36/63 (57%)
 Frame = +3

Query: 231 IERRKAEKYCPSTWEIKFNLTSLSSGVYKFWPPVLTSRKPGFPGDEFKNR*ESVDMEYMD 410
           ++RR A+KY PSTW IKF L S+ +G+YK    + ++ +      + +     +D E+M 
Sbjct: 511 VDRRVADKYIPSTWTIKFLLNSIKNGIYKLRLAIASANR-----SDLQVYLNDMDKEHMV 565

Query: 411 FTV 419
           F V
Sbjct: 566 FQV 568


>ref|XP_002880453.1| hypothetical protein ARALYDRAFT_481121 [Arabidopsis lyrata subsp.
           lyrata] gi|297326292|gb|EFH56712.1| hypothetical protein
           ARALYDRAFT_481121 [Arabidopsis lyrata subsp. lyrata]
          Length = 681

 Score = 48.5 bits (114), Expect(3) = 3e-09
 Identities = 21/40 (52%), Positives = 27/40 (67%)
 Frame = +1

Query: 16  RLRQYELWDGCTDTHPESDVVFTISVRHPRKDRFFAHADR 135
           R RQY LWD   D +P++D+V+TI V   R+D FFAH  R
Sbjct: 522 RFRQYGLWDRYADLYPQNDLVYTIGVSDYRRDWFFAHVTR 561



 Score = 32.7 bits (73), Expect(3) = 3e-09
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = +2

Query: 386 VCRHGIHGLHRLSSIDISSS 445
           + RHGIHGL+RL SIDI+ +
Sbjct: 626 IARHGIHGLYRLYSIDIAGN 645



 Score = 24.3 bits (51), Expect(3) = 3e-09
 Identities = 10/23 (43%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +3

Query: 249 EKYCPSTWEIKFNLTSLSS-GVY 314
           + Y P+TW+I FNL +++  G+Y
Sbjct: 566 DTYQPTTWQIIFNLKNVNRIGLY 588


>ref|XP_004136251.1| PREDICTED: rhamnogalacturonate lyase B-like [Cucumis sativus]
          Length = 642

 Score = 45.4 bits (106), Expect(3) = 9e-09
 Identities = 18/40 (45%), Positives = 27/40 (67%)
 Frame = +1

Query: 16  RLRQYELWDGCTDTHPESDVVFTISVRHPRKDRFFAHADR 135
           R RQY LW+   + HP++D+V+++ V    KD FFAH +R
Sbjct: 474 RFRQYGLWEKYAELHPDADLVYSVGVSDYTKDWFFAHVNR 513



 Score = 35.8 bits (81), Expect(3) = 9e-09
 Identities = 19/45 (42%), Positives = 25/45 (55%)
 Frame = +2

Query: 311 LQILATRSDLKKTWFSR**I*EQIGVCRHGIHGLHRLSSIDISSS 445
           LQI     + K + F+   I     + RHGIHGL+RL S+DI  S
Sbjct: 555 LQIQVNNPEAKPSLFTTGVIGHDNAIARHGIHGLYRLYSVDILGS 599



 Score = 22.3 bits (46), Expect(3) = 9e-09
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 237 RRKAEKYCPSTWEIKFNLTSL 299
           +R    +  +TWEIKF L ++
Sbjct: 514 KRNDGSHLATTWEIKFRLDNI 534


>ref|XP_004161743.1| PREDICTED: LOW QUALITY PROTEIN: rhamnogalacturonate lyase B-like
           [Cucumis sativus]
          Length = 635

 Score = 45.4 bits (106), Expect(3) = 9e-09
 Identities = 18/40 (45%), Positives = 27/40 (67%)
 Frame = +1

Query: 16  RLRQYELWDGCTDTHPESDVVFTISVRHPRKDRFFAHADR 135
           R RQY LW+   + HP++D+V+++ V    KD FFAH +R
Sbjct: 474 RFRQYGLWEKYAELHPDADLVYSVGVSDYTKDWFFAHVNR 513



 Score = 35.8 bits (81), Expect(3) = 9e-09
 Identities = 19/45 (42%), Positives = 25/45 (55%)
 Frame = +2

Query: 311 LQILATRSDLKKTWFSR**I*EQIGVCRHGIHGLHRLSSIDISSS 445
           LQI     + K + F+   I     + RHGIHGL+RL S+DI  S
Sbjct: 555 LQIQVNNPEAKPSLFTTGVIGHDNAIARHGIHGLYRLYSVDILGS 599



 Score = 22.3 bits (46), Expect(3) = 9e-09
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 237 RRKAEKYCPSTWEIKFNLTSL 299
           +R    +  +TWEIKF L ++
Sbjct: 514 KRNDGSHLATTWEIKFRLDNI 534


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