BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00051085
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containi...   149   3e-34
ref|XP_003626292.1| Pentatricopeptide repeat-containing protein ...   136   2e-30
ref|NP_187185.2| pentatricopeptide repeat-containing protein [Ar...   126   2e-27
gb|AAF27040.1|AC009177_30 hypothetical protein [Arabidopsis thal...   126   2e-27
ref|XP_004156421.1| PREDICTED: putative pentatricopeptide repeat...   124   6e-27

>ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
           [Vitis vinifera]
          Length = 656

 Score =  149 bits (375), Expect = 3e-34
 Identities = 72/125 (57%), Positives = 93/125 (74%)
 Frame = -1

Query: 377 SRTLLFSLNHVDLSSLLSVCGKEGNLHLGSSLHASILKIPEFRNLNSDRNIRNTLVVWNS 198
           S T  F++N VD+S LLS+CG+EG LHLGSSLHASI+K   F + N+  N+RN +VVWNS
Sbjct: 35  SETSKFAINQVDISFLLSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNS 94

Query: 197 LLSMYSQCGQLSSAIKVFDEMPIRDTVSWNSIVSGFFRNREFGMGFGYFKEMLRFGFCRF 18
           LLSMYS+CG+L  A KVFD MP++DT+SWNS +SG   N +  MGF  FK++   G  +F
Sbjct: 95  LLSMYSRCGELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQF 154

Query: 17  DRATL 3
           D+ATL
Sbjct: 155 DQATL 159



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/100 (34%), Positives = 58/100 (58%)
 Frame = -1

Query: 341 LSSLLSVCGKEGNLHLGSSLHASILKIPEFRNLNSDRNIRNTLVVWNSLLSMYSQCGQLS 162
           +S++L V G + +L LG  +H+ I+K          ++  +   V N L++MYS+CG L 
Sbjct: 361 ISAILGVFGIDTSLALGKQIHSLIIK----------KSFGSNYFVNNGLINMYSKCGDLD 410

Query: 161 SAIKVFDEMPIRDTVSWNSIVSGFFRNREFGMGFGYFKEM 42
            +IK+F  MP R++VSWNS+++ F R+         ++EM
Sbjct: 411 DSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEM 450


>ref|XP_003626292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355501307|gb|AES82510.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 650

 Score =  136 bits (342), Expect = 2e-30
 Identities = 69/132 (52%), Positives = 95/132 (71%), Gaps = 2/132 (1%)
 Frame = -1

Query: 392 LAPFSSRTLLFSLNHVDLSSLLSVCGKEGNLHLGSSLHASILKIPEFRNLNSDRNIRNTL 213
           L P ++++LL   NH DL+SLL++CG++ NL LGSS+HA I+K P   + + D + RN L
Sbjct: 23  LFPSTTKSLL---NHADLTSLLTLCGRDRNLTLGSSIHARIIKQPP--SFDFDGSQRNAL 77

Query: 212 VVWNSLLSMYSQCGQLSSAIKVFDEMPIRDTVSWNSIVSGFFRNREFGMGFGYFKEMLRF 33
            +WNSLLSMYS+CG+  +A  VFD MP+RDTVSWN+++SGF RN +F   F +FK+M   
Sbjct: 78  FIWNSLLSMYSKCGEFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTES 137

Query: 32  G--FCRFDRATL 3
               CRFD+ATL
Sbjct: 138 NRVCCRFDKATL 149



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/100 (33%), Positives = 57/100 (57%)
 Frame = -1

Query: 341 LSSLLSVCGKEGNLHLGSSLHASILKIPEFRNLNSDRNIRNTLVVWNSLLSMYSQCGQLS 162
           +S++L V G    L LG  +H+ I+K          +N      V N L++MYS+CG LS
Sbjct: 355 VSAVLGVFGVGTYLALGKQIHSLIIK----------KNFCENPFVGNGLVNMYSKCGDLS 404

Query: 161 SAIKVFDEMPIRDTVSWNSIVSGFFRNREFGMGFGYFKEM 42
            ++ VF +M  +++VSWNS+++ F R+ +      +++EM
Sbjct: 405 DSLLVFYQMTQKNSVSWNSVIAAFARHGDGFKALQFYEEM 444


>ref|NP_187185.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546760|sp|Q9MA85.2|PP215_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g05340 gi|332640702|gb|AEE74223.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 658

 Score =  126 bits (317), Expect = 2e-27
 Identities = 70/121 (57%), Positives = 82/121 (67%), Gaps = 1/121 (0%)
 Frame = -1

Query: 362 FSLNHVDLSSLLSVCGKEGNL-HLGSSLHASILKIPEFRNLNSDRNIRNTLVVWNSLLSM 186
           F LNHVD+S LLS+CG+EG   HLG  LHASI+K PEF         RN LVVWNSLLS+
Sbjct: 40  FLLNHVDMSLLLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSL 99

Query: 185 YSQCGQLSSAIKVFDEMPIRDTVSWNSIVSGFFRNREFGMGFGYFKEMLRFGFCRFDRAT 6
           Y++CG+L  AIK+FDEMP+RD +S N +  GF RNRE   GF   K ML  G   FD AT
Sbjct: 100 YAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG--GFDHAT 157

Query: 5   L 3
           L
Sbjct: 158 L 158



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/100 (33%), Positives = 53/100 (53%)
 Frame = -1

Query: 341 LSSLLSVCGKEGNLHLGSSLHASILKIPEFRNLNSDRNIRNTLVVWNSLLSMYSQCGQLS 162
           +S++L V   + +L LG  LH+ ++K          R       V N L++MYS+CG L+
Sbjct: 360 VSAVLGVSFIDNSLGLGKQLHSLVIK----------RKFSGNTFVNNGLINMYSKCGDLT 409

Query: 161 SAIKVFDEMPIRDTVSWNSIVSGFFRNREFGMGFGYFKEM 42
            +  VF  MP R+ VSWNS+++ F R+         ++EM
Sbjct: 410 DSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEM 449


>gb|AAF27040.1|AC009177_30 hypothetical protein [Arabidopsis thaliana]
          Length = 770

 Score =  126 bits (317), Expect = 2e-27
 Identities = 70/121 (57%), Positives = 82/121 (67%), Gaps = 1/121 (0%)
 Frame = -1

Query: 362 FSLNHVDLSSLLSVCGKEGNL-HLGSSLHASILKIPEFRNLNSDRNIRNTLVVWNSLLSM 186
           F LNHVD+S LLS+CG+EG   HLG  LHASI+K PEF         RN LVVWNSLLS+
Sbjct: 40  FLLNHVDMSLLLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSL 99

Query: 185 YSQCGQLSSAIKVFDEMPIRDTVSWNSIVSGFFRNREFGMGFGYFKEMLRFGFCRFDRAT 6
           Y++CG+L  AIK+FDEMP+RD +S N +  GF RNRE   GF   K ML  G   FD AT
Sbjct: 100 YAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG--GFDHAT 157

Query: 5   L 3
           L
Sbjct: 158 L 158



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/100 (33%), Positives = 53/100 (53%)
 Frame = -1

Query: 341 LSSLLSVCGKEGNLHLGSSLHASILKIPEFRNLNSDRNIRNTLVVWNSLLSMYSQCGQLS 162
           +S++L V   + +L LG  LH+ ++K          R       V N L++MYS+CG L+
Sbjct: 360 VSAVLGVSFIDNSLGLGKQLHSLVIK----------RKFSGNTFVNNGLINMYSKCGDLT 409

Query: 161 SAIKVFDEMPIRDTVSWNSIVSGFFRNREFGMGFGYFKEM 42
            +  VF  MP R+ VSWNS+++ F R+         ++EM
Sbjct: 410 DSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEM 449


>ref|XP_004156421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 833

 Score =  124 bits (312), Expect = 6e-27
 Identities = 64/117 (54%), Positives = 81/117 (69%), Gaps = 2/117 (1%)
 Frame = -1

Query: 386 PFSSRTLLFSLNHVDLSSLLSVCGKEGNLHLGSSLHASILKIPEFRNLNSDRNIRNTLVV 207
           PF   +  F LNH+D S LLS+CG+EGNLHLGSSLHASI+K  E  N        N +V+
Sbjct: 33  PFPETSSTFVLNHLDPSFLLSICGREGNLHLGSSLHASIIKSFELSNHY------NGVVI 86

Query: 206 WNSLLSMYSQCGQLSSAIKVFDEMPIRDTVSWNSIVSGFFRNREF--GMGFGYFKEM 42
            NSL+SMY +CG+L  A+KVFDEM  RDT+SWN+++ GF RN +F  G+G   F EM
Sbjct: 87  MNSLISMYDRCGKLPDAVKVFDEMVTRDTISWNALIGGFVRNGKFFAGLGMQVFYEM 143



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/100 (33%), Positives = 57/100 (57%)
 Frame = -1

Query: 341 LSSLLSVCGKEGNLHLGSSLHASILKIPEFRNLNSDRNIRNTLVVWNSLLSMYSQCGQLS 162
           +S +L V G + +L LG  +H+ ++K          RN      V N L++MYS+CG L 
Sbjct: 288 VSVVLGVFGADTSLRLGQQVHSFVVK----------RNFICNPFVSNGLINMYSKCGALD 337

Query: 161 SAIKVFDEMPIRDTVSWNSIVSGFFRNREFGMGFGYFKEM 42
            ++KVFD M  R++V+WNS+++ F R+ +       +++M
Sbjct: 338 ESMKVFDRMRERNSVTWNSMIAAFARHGDALKALQLYEDM 377