BLASTX nr result

ID: Cephaelis21_contig00049801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00049801
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...    73   2e-11
dbj|BAB01940.1| non-LTR retrolelement reverse transcriptase-like...    70   2e-10
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...    67   1e-09
emb|CCA65996.1| hypothetical protein [Beta vulgaris subsp. vulga...    67   2e-09
emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana] gi|7...    66   3e-09

>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 855

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
 Frame = +3

Query: 162 LIRFDQEEDYHRCWLHQAWKFKNHVMKILKWTPDFS-VKEEPTVAPVWESLEQLPLFLFA 338
           +IRF++E++Y        W+     + +  W+P+F  +++E T  P+W  L  +PL L+ 
Sbjct: 95  MIRFEREDEYLSALTGGPWRAFGSYLLVQAWSPEFDPLRDEITTTPIWVRLMNIPLSLYH 154

Query: 339 RSPLFSIGKLIGNPLKIDAATIALTRPSVARICIEIDLRK 458
            S L  I   +G P+K+D  T+ + R   AR+CIE+DL K
Sbjct: 155 TSILMGIAGSLGKPVKVDMTTLHVERARFARMCIEVDLAK 194


>dbj|BAB01940.1| non-LTR retrolelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 591

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 28/100 (28%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
 Frame = +3

Query: 162 LIRFDQEEDYHRCWLHQAWKFKNHVMKILKWTPDFS-VKEEPTVAPVWESLEQLPLFLFA 338
           ++RF++EE++        W+     + +  W+P+F+ +K+E    P+W  +  +P+  + 
Sbjct: 120 MVRFEKEEEFLTALTGGPWRAFGSCLLVKAWSPEFNPLKDEIVTTPIWVRIADMPVSFYH 179

Query: 339 RSPLFSIGKLIGNPLKIDAATIALTRPSVARICIEIDLRK 458
           +S L S+ + +G PLK+D   +   R   AR+C+E+DL++
Sbjct: 180 KSILMSVAQGLGRPLKVDLTMLHFERGRFARVCVEVDLKR 219


>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
 Frame = +3

Query: 162 LIRFDQEEDYHRCWLHQAWKFKNHVMKILKWTPDFSV-KEEPTVAPVWESLEQLPLFLFA 338
           L+RF   ED     +   +  +N  + + +WTPDF++ K+     P+W  L QLPL L+ 
Sbjct: 156 LLRFMNREDRETVMMRGPYTIRNMPIILKEWTPDFNLSKDLEKTMPIWVKLPQLPLCLWG 215

Query: 339 RSPLFSIGKLIGNPLKIDAATIALTRPSVARICIEIDL 452
              L  IG  IGNPL  D  T    R S  RI +E+D+
Sbjct: 216 LKSLNKIGSAIGNPLITDECTAQKLRVSYVRILVEVDI 253


>emb|CCA65996.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 744

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
 Frame = +3

Query: 162 LIRFDQEEDYHRCWLHQAWKFKNHVMKILKWTPDFSVKEEP-TVAPVWESLEQLPLFLFA 338
           L +F+   D  +      W   NH + + +W PDF   +       VW    +LPL  + 
Sbjct: 165 LFKFNNGNDMEKALFGGPWFILNHYLMLTRWKPDFRPSQSVFDKIMVWIRFPELPLEYYD 224

Query: 339 RSPLFSIGKLIGNPLKIDAATIALTRPSVARICIEIDLRK 458
           +  LF+I   +G P+K+D AT  + R   AR+CIE+DL K
Sbjct: 225 KEALFAIAGKVGKPIKVDYATDHMARGRYARVCIELDLAK 264


>emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268308|emb|CAB78602.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 655

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
 Frame = +3

Query: 162 LIRFDQEEDYHRCWLHQAWKFKNHVMKILKWTPDFS-VKEEPTVAPVWESLEQLPLFLFA 338
           ++RF+ EEDY        W+    ++ +  W+P+F+ +++     PVW  +  LP+  + 
Sbjct: 135 MVRFEVEEDYMMALTGGPWRVLGSILMVQAWSPEFNPLRDVIETTPVWVRVANLPVTFYH 194

Query: 339 RSPLFSIGKLIGNPLKIDAATIALTRPSVARICIEIDLR 455
              L  I   +G P+K+D  T+   R   AR+C+E++L+
Sbjct: 195 NEILLGIAAGLGKPIKVDLTTLRKERGRFARVCVEVNLK 233


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